Gene Snas_5637 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5637 
Symbol 
ID8886852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5992222 
End bp5993691 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content70% 
IMG OID 
Producttype I phosphodiesterase/nucleotide pyrophosphatase 
Protein accessionYP_003514360 
Protein GI291303082 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0515982 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAGAC GACACCTCCT CGGCATGGCC GCCGCCGCGA CCGCCGCGGC CGCGCTGCCC 
CTCTCCCCGG CACGGGCAGC CGAGACATCC CCCAAGGTCC TGGTGATCGG CGTCGACGGT
TTCGTCGCCG ACCGGGTCCG CGACGCGAAC GCCCCCACCC TCGCCAAACT CCAGGACACC
GCCCTGGACG CGCGCAGCCT GCTGTACACG CAACCCATGG CGCCCACCAG TTCCGGGCCT
GGCTGGTCGA CGATCCTGAC CGGCGTGTGG CCCGACAAGC ACAAGGTGGT CGACAACTCC
TTCGGCGGCA ACGACCTCAA GTCCTATCCG GACTGGCTGT CCACGGCGAA GGCCGCCCGA
CCCGAGATCC AGACCTGGGC CGCCGCCGAC TGGAAACCCA TCGGCGATCA CCTGTTCGGC
GACGGCATCG ACGCCACGAT CGTGCTCGAC GGCGACAAGG ACGGGTACGT CGAGCACGAC
GCCACCATCG CCGATGAGAC CGAGGCGCAC CTGGCCAAGG ACGCCGCCGA CGCCACCTTC
GTCTACTTCG GTCAGCTCGA CATCGTCGGC CACGCCGACG GATCCGGCTC CCAGAACTAC
CTCGACGAGA TCGCCGTCGT GGACGGCTTC GTGTCCCGGC TGCTGGCCGC GGTCGAATCC
CGGCCCACCC GGGCCGAGGA GAACTGGCTG ATCATGCTGA CCACCGACCA CGGACACCTC
GACTCCGGCG GCCACGGCGG CGACTCGCTG ATCGAACGCG GCACCTTCAT CCTGGCCACC
GGCGACGGCA TCAGCGCCGC CAAGCCGGTG ACGACGCGGC TGGTCGACGT CGCCGCCTCG
GCGCTGATCC ACCTGGGCGC CACGCCATCC GACACCATGG ACGGCCGAGC AGTGACCCAT
GAGGACTCAG ACCCGTTCCA GACGGTGAAG CTTCAGCCGG CGGTCACCGA GGACATCGAC
GCCGAGATCC TCGGCTGGTC CCCGGAACTG CCGCAGGGCT GGAGCCGCGA CAACGCGAAG
CTGCCCGAGG GCGGCGTCAC CGAATGGGCG GGCTGGAGCC TGGTGTCCGA CGCGTTCTGG
TCCTCGGCGC AGCGCGGCCA GAACCGCGAG ACCTTCGTGC GCGGCCGGGG CACCTTCGCG
GTGGCCGACA GCGACGAGTG GGCCGACACC GACGCGGCGT CCGGCAAGAC CTTCGACTCA
ACACTGTGGA CCCCTCCGGT GGCCGCCAAC GCGAAGGTCA CCGTCCGGTT GACCCACCTC
TACCGGCAGG AGGGCGAGCA GCGCGGCGAG ATCCTGGCCA GCTGGGACGA CGGCGAACCG
CAGGTCGTGC GCACCCTGTC GACCGACGTC AACGGCCCCG ACGCGATCGA CGTCGACCGC
CCCTCGGACG CGCGCGAGGT CAGGATCGGG TTCCGGCTGA CCGGCGTCAA CAACTGGTAC
TGGGCCGTCG ACGACGTGCG CGTCGCATAG
 
Protein sequence
MRRRHLLGMA AAATAAAALP LSPARAAETS PKVLVIGVDG FVADRVRDAN APTLAKLQDT 
ALDARSLLYT QPMAPTSSGP GWSTILTGVW PDKHKVVDNS FGGNDLKSYP DWLSTAKAAR
PEIQTWAAAD WKPIGDHLFG DGIDATIVLD GDKDGYVEHD ATIADETEAH LAKDAADATF
VYFGQLDIVG HADGSGSQNY LDEIAVVDGF VSRLLAAVES RPTRAEENWL IMLTTDHGHL
DSGGHGGDSL IERGTFILAT GDGISAAKPV TTRLVDVAAS ALIHLGATPS DTMDGRAVTH
EDSDPFQTVK LQPAVTEDID AEILGWSPEL PQGWSRDNAK LPEGGVTEWA GWSLVSDAFW
SSAQRGQNRE TFVRGRGTFA VADSDEWADT DAASGKTFDS TLWTPPVAAN AKVTVRLTHL
YRQEGEQRGE ILASWDDGEP QVVRTLSTDV NGPDAIDVDR PSDAREVRIG FRLTGVNNWY
WAVDDVRVA