Gene Snas_5622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5622 
Symbol 
ID8886837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5977638 
End bp5979203 
Gene Length1566 bp 
Protein Length521 aa 
Translation table11 
GC content67% 
IMG OID 
ProductCarboxylesterase 
Protein accessionYP_003514345 
Protein GI291303067 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00384767 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACCCGAA ACCGCAAACT CCTCACCGCC GCGACCGCCG CCCTGGCGGT CGCCGCCATC 
GCCATCACGA CCACCGCCTA CGCCCAGGAC ACCGACCCCA CCCAGAACCC CATAGTGGAC
ACGAACTCCG GCCCCGTGCG CGGCACCGAC TCGGGCACCG TCCGCACCTA CCAGGGCATC
CCCTACGCCG CCCCACCCAC CGGCGACCTG CGCTGGCAAC CCCCCAAGAA GGCCGAACCC
TGGACCCAAC CCCTCGACGC CACCAAATCC GGCAAGCCCT GCGTCCAGCC CACCGACCAG
CCCATCGCCA TCCCCGGCGG CGAGGAGGAC TGCCTCACCC TCAACGTCAC CTCCCCCACC
AAGGGCGACA ACAAAAAGCC CGTCATCGTG TGGATCCACG GCGGCAGCTT CACCTACGGC
GACGGCGCCT CCTACGGTGC CGAGAAACTC GCCACCCGGG GCGACGCGGT CGTCGTCACG
ATCAACTACC GCCTCGGCGC CTTCGGCTTC CTGTCCCACC CCGACCTGAA AAACGCCGAC
AACCTGGGGC TCCGCGACCA ACAAGCCGCC CTGAAATGGG TGCGCGCCAA CGCCTCCGCC
TTCGGCGGCG ACAACCGAAA CGTCACCATC ATGGGCGAGT CCGGCGGCGG CTACAGCATC
TGCGGCCACC TGGCGGCACC GAAATCGGCC GGACTGTTCG ACAAAGCCAT CATCCACAGT
GCAGGATGCG TCGGCAGCGC CGACGCCAGC ATGACCCGCG AACAGGCCGA GAAGAACGGC
GAGGACTTCG CCGAACGCCT CGACTGCACC GACGTCGCAT GCATGCGCGC CAAGGATTCC
GAAACGATCC TGACCGCCGC CGAGAGCGGC CACGAGGGCT ACCGTCCCTT CCACGGCACC
AAGACCCTGC CGCTGTCCCC GTCCGAGGCC ATCGAGTCCG GCCGCATCAA CGAGGTCCCG
GTGCTGCACG GCTCCAACCA CGACGAGGAG AACGGCCGCC TCGCCGGAGA GGAACTGGCG
ACCGGAACAC CGTTGACCGA GGACGACTAC CGCAAGCGCA TGCGCGAGAC CTTCGGCGAT
GACGCCGAAG CCGTCATGGC CGAATACCCG GTGTCCGACT ACGCATCCCC CAGCAACGCG
CTCGGCGCAG CCCAGACCGA CGCCAACTGG TCCACCCACT CCTACGACAC CCAAAAGGCA
CTCGCCAAGC ACGTCCCGGT CTACGCCTTC GATATCGCCG AGCCCAACGC CCCCTGGTTC
AACGGCATGC CCCGCCCCAG CTTCACCATC GGCACCGGCC ACATGCAGGA ACTGGCCTAC
TTCTACGACA ATGCCCTGTT CGAGAAACGC GACGGCGACC AGGAGCGACT GTCCGACGCA
CTGATCGACT ACTGGAGCCG CTTCGTCCAC AGTAGCGACA TGAACGAGCG CGGCCTGCCG
AAGTGGAAGC AGTTCAAGCA CCACCGCCCC TACACCCAAA AACTGGTCGC CGACCTCGAC
GCGATCGGCC GCACCGACTA CGCCACCGAA CACCACTACG ACTTCTGGAA GTCCCTGAAC
CGCTGA
 
Protein sequence
MTRNRKLLTA ATAALAVAAI AITTTAYAQD TDPTQNPIVD TNSGPVRGTD SGTVRTYQGI 
PYAAPPTGDL RWQPPKKAEP WTQPLDATKS GKPCVQPTDQ PIAIPGGEED CLTLNVTSPT
KGDNKKPVIV WIHGGSFTYG DGASYGAEKL ATRGDAVVVT INYRLGAFGF LSHPDLKNAD
NLGLRDQQAA LKWVRANASA FGGDNRNVTI MGESGGGYSI CGHLAAPKSA GLFDKAIIHS
AGCVGSADAS MTREQAEKNG EDFAERLDCT DVACMRAKDS ETILTAAESG HEGYRPFHGT
KTLPLSPSEA IESGRINEVP VLHGSNHDEE NGRLAGEELA TGTPLTEDDY RKRMRETFGD
DAEAVMAEYP VSDYASPSNA LGAAQTDANW STHSYDTQKA LAKHVPVYAF DIAEPNAPWF
NGMPRPSFTI GTGHMQELAY FYDNALFEKR DGDQERLSDA LIDYWSRFVH SSDMNERGLP
KWKQFKHHRP YTQKLVADLD AIGRTDYATE HHYDFWKSLN R