Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_5621 |
Symbol | |
ID | 8886836 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 5976955 |
End bp | 5977542 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003514344 |
Protein GI | 291303066 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00254336 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGGAAATC GCGAGCAACT TCTGGACGCG GCGAAGCAGT GTCTGATTCA GAAGGGCTAT GAGCGCACCA CCGTGCGCGA CATCTCGGAC CTTGCGGGCG TCAGCAAGGC GGCCATCGGC TACCACTTCG GATCGAAGGA GGCGCTGTTG AACGCGGCCC TGTTCGAGGT GCTCGGCGGC GGGGACTCGG GCTTGTCGCC GACGGCCGAG GCGGCCGACC CGGACGCGAC GCCCGTCCAG CGGTTCACGG CACTGTGGAC GAACATGATG GCGGCCTACG GCGGAGAGGA CAAGACCTTC TGGGCCGCGA ACCTGGAGTC GGTGCTGGTG GCCTATCGGG ACGCGTCGGT GCGCGAGCAC CTGTCCGCGG GCTTCGAGGA GGGGCGCAGC GGCATCACGT CGGTGCTGAC CGGCGTCGAG GAGTCGCAGG TGCCGCCCGA GACGATCCGC ACCCTCGGTT CGGTGCAGAT GGCGCTGTTG AGCGGCGTGA TGATCCAGTA CCTGGTCAAC CCGGACACGG CGCCGTCGGC CGAGGAGTTG TTCCGGGGGA TCCACGCGCT GGCGCGCATC ACCCCCGACA CCGAGTGA
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Protein sequence | MGNREQLLDA AKQCLIQKGY ERTTVRDISD LAGVSKAAIG YHFGSKEALL NAALFEVLGG GDSGLSPTAE AADPDATPVQ RFTALWTNMM AAYGGEDKTF WAANLESVLV AYRDASVREH LSAGFEEGRS GITSVLTGVE ESQVPPETIR TLGSVQMALL SGVMIQYLVN PDTAPSAEEL FRGIHALARI TPDTE
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