| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5617 |
|---|
| Symbol | |
|---|
| ID | 8886832 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 5972511 |
|---|
| End bp | 5973350 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | Abortive infection protein |
|---|
| Protein accession | YP_003514340 |
|---|
| Protein GI | 291303062 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.290139 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0104592 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAACCG TTCCCATCGC TCCCCCATCA CAGTCCCTCG CCCACCGCTT CAGTCTGCCG
ACGTTTCTCC TCGTCACGCT ACTGGGCGGC TGGGTCGCCG TCACCCCCCT GTGGCTCTTC
GGCGGGAACG CCGCGCTCGG CATCGCCGGG ATGGCCATGA TGTCCACTCC CGCGCTGGGG
GTGCTGGCCG CCCGTCGCCG CGGCGTCCGA TTCCGGGACC TCGCCCACGC AACCGGATTG
ACGCTCGGCC CGCGCCGAAC CCGCACCATC GCCGTTGCCA TCGCCGTGCT GCTGGGCCTC
CCCGCGCTGG CCGGGATCGC CATCGCGATC GCCGCCGGTT CCGGCTTGGC CACACTCAAC
CCGGGGATGT CGGGCGCGCT GCTCGCCGTC GTCATGACCC CGCTGACCAC GTTCCTCATG
GTCCCGACCG CGTTCGGCGA GGAGTGGGGC TGGCGCGGTC TCCTTCTGCC GCACCTGATG
GAACGCCACT CACGACGCAA GGCCATTGTG GTCACCGGCT TGATCTGGTG TGTCTGGCAC
GCACCCCTGG GCCTCTTCTT CGGAGCGTCG GCGCCCTTGT ACTTCATCCC GCTGAGCGCG
ATGTTCATGG TCTTCGCCGG TCCGGTCAGC TGGGCACGGT TGGCCACCGG TTCCGTGTGG
CCCGCGGTCC TCGCCCACGC CGGACTGAAC GCGTCCGCGG CAACGCTGTT CACATCCCTG
TCCTCAGGCG CCACCCCCGC CGACATCGGA ATCGGCGCGG TGGTCGGCAT GGCTCTCTGG
GCGGCGGCTC TGCTGCTGAC GACAGCGATC CTGTTCCGCA CCAAACATCA ACACCCGTGA
|
|---|
| Protein sequence | MSTVPIAPPS QSLAHRFSLP TFLLVTLLGG WVAVTPLWLF GGNAALGIAG MAMMSTPALG
VLAARRRGVR FRDLAHATGL TLGPRRTRTI AVAIAVLLGL PALAGIAIAI AAGSGLATLN
PGMSGALLAV VMTPLTTFLM VPTAFGEEWG WRGLLLPHLM ERHSRRKAIV VTGLIWCVWH
APLGLFFGAS APLYFIPLSA MFMVFAGPVS WARLATGSVW PAVLAHAGLN ASAATLFTSL
SSGATPADIG IGAVVGMALW AAALLLTTAI LFRTKHQHP
|
|---|
| |