Gene Snas_5602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5602 
Symbol 
ID8886817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5953864 
End bp5954742 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content68% 
IMG OID 
Productinner-membrane translocator 
Protein accessionYP_003514325 
Protein GI291303047 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCAGC AACTCGCCAA CGGGTTGTTC TCCGGCGCGA TCTACGCCCT GTTCGCGATC 
GGCTTCACAT TGGTGTTCGG GATCCTGCGG CACCTCAACC TGGCGCACGC CGCCATCTAC
ACCGCCGGTG CCCTGATCGG CATCGAACTC GTCGAGGGCC AGGGTCTGCC GCTGTGGCTG
GCCTTCCCGC TGGCGATCCT GGCCGGGACG GCGCTCGGCC TGATCCTGGA ACGCTCGGCG
TTTCGGCCGC TGGCCGGGCG TCGCGACGAA CACTTCGCCG GACTCATCTC CTCCGTCGCC
TTCGGAGGGA TGCTGATCGC GCTGTTGCAG GCCCGGTTCG GTTCCGAGCC GCGCAGCTTC
TCGCAGTCGG CGTTCCCCAA CGAGATCCTC ACGATCGCGG GGGTGACCGT CAGCCTGGCC
CAGCTGCTCA CCCTCGGACT CGCCCTGGCA CTCATGCTGG GCCTGGCCTG GCTGCTGTCG
AAGTCCGCGC TGGGCCGCGC GATGCGGGCG GTGGCCGAGA ACCCCCGCGC CGCCCGGGTG
CTCGGCATCA ATGTGGAGGG TGTCACCGCC GGAACCTACG CGCTGTCTTC AGCGCTGGGT
TCGTGCGCCG GAGTGCTGAT GGCGCTCAAC GTCGGCCAGG GCGACCTGCG CATGGGGCTG
TCCATCGAGC TGACCGGCTT CGCCGTCATC ATCCTGGGCG GCCTGGGTTC ACTGTGGGGA
GCCATGGCGG CGGGCCTGCT GCTCGGCTTC GCCGAGGCGT TCACGGTGCA CCTCATCGAC
TCCACCTGGA AGAACGTCGT CGCCTTCGTC CTGCTGTTCG TGATTCTGCT GACGCGACCC
CAGGGCCTGT TCGGACAAGT CAAGACCCGG GAGGTTTGA
 
Protein sequence
MLQQLANGLF SGAIYALFAI GFTLVFGILR HLNLAHAAIY TAGALIGIEL VEGQGLPLWL 
AFPLAILAGT ALGLILERSA FRPLAGRRDE HFAGLISSVA FGGMLIALLQ ARFGSEPRSF
SQSAFPNEIL TIAGVTVSLA QLLTLGLALA LMLGLAWLLS KSALGRAMRA VAENPRAARV
LGINVEGVTA GTYALSSALG SCAGVLMALN VGQGDLRMGL SIELTGFAVI ILGGLGSLWG
AMAAGLLLGF AEAFTVHLID STWKNVVAFV LLFVILLTRP QGLFGQVKTR EV