Gene Snas_5589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5589 
Symbol 
ID8886804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5939440 
End bp5940423 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content68% 
IMG OID 
Productdaunorubicin resistance ABC transporter ATPase subunit 
Protein accessionYP_003514312 
Protein GI291303034 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTACCC ATACGACGAC CAGAAGTCCG CGAACCCGTG GCACGGCGGC CATAGAGGTC 
GCCGGACTGC GCAAGTCCTA CGGCGACCAT CTCGTCCTGG ACGGCATCGA CTTCACCGTC
CCCACCGGCT CGATCTTCTC GATGCTGGGC CCCAACGGCG CGGGCAAGAC CACCACCGTC
CAGATTCTGT CCACACTCAT CAAACCCGAC GCGGGCGTCA TCCGGGTCGC CGGACACGAC
CTGGCCGCCG CGGCCCAGTC GGTGCGCGGC GCCATCGGTG TCACCGGTCA GTTCTCCGCC
GTCGACAACC TGCTCACCGG CCAGGAGAAC CTGCGGCTGA TGGCCGACCT CAACCACCTG
ACCCGCGCGG AGGGCCGCCG TCGCAGTGCC GAACTGCTGG AACGGTTCGA GCTGACCGAC
GCGGCCGCCA AACAGCCCGC CACCTACTCC GGCGGCATGC GCCGGCGGCT GGATCTGGCC
ATGACCCTGA TGGGAGACCC ACGACTGATC TTCCTGGACG AACCCACCAC CGGCCTCGAC
CCGGCCGGAC GGCGGGTCAT GTGGCGGATC ATCCGCGACC TCGTCGACGA GGGTGTAACC
ATCTTCCTGA CCACCCAGTA CCTGGAGGAA GCCGACCAGC TCGCCGACCA GGTGGCCGTC
CTCGACAAGG GAACCCTTGT CGCGCAAGGC ACCCCGGCCG AACTCAAACG GCTGATACCC
GGCGGCCACA TCACGCTGCG GTTCAACGAC GTCCAGGACC TGGACACCGC CGCCAACACC
CTGACCGTCT CGGCCCGCGA CGAGACCGCG CTGACGCTCC AGACCCCCAG CGAGGGCGAC
ATGAAGTCGC TGCGGGCGCT GTTGGCCCGG CTGGACGCCG CCGAGATCGA ACCCGCCGAC
CTCTCCATCC ACACCCCCGA CCTCGACGAC GTGTTCCTGG CACTCACCGG ACACGACGCC
ACCACGAAGG ACAGTTCACA ATGA
 
Protein sequence
MSTHTTTRSP RTRGTAAIEV AGLRKSYGDH LVLDGIDFTV PTGSIFSMLG PNGAGKTTTV 
QILSTLIKPD AGVIRVAGHD LAAAAQSVRG AIGVTGQFSA VDNLLTGQEN LRLMADLNHL
TRAEGRRRSA ELLERFELTD AAAKQPATYS GGMRRRLDLA MTLMGDPRLI FLDEPTTGLD
PAGRRVMWRI IRDLVDEGVT IFLTTQYLEE ADQLADQVAV LDKGTLVAQG TPAELKRLIP
GGHITLRFND VQDLDTAANT LTVSARDETA LTLQTPSEGD MKSLRALLAR LDAAEIEPAD
LSIHTPDLDD VFLALTGHDA TTKDSSQ