Gene Snas_5588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5588 
Symbol 
ID8886803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5938658 
End bp5939443 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content66% 
IMG OID 
ProductABC-2 type transporter 
Protein accessionYP_003514311 
Protein GI291303033 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACAT ACGTCATCCG CGACTCCACA GCCATGCTGC GCCGCAACAT AAAGAAGGCC 
ATTCGCTATC CGTCGCTGAC CCTCATGGTC ATCGGCATGC CCATCATCTT CCTGGTGCTG
TTCGTGTACG TCTTCGGCTC CACGCTCGGC GACGGCCTGG GCGGAACCTC CGGCGGCCGC
GACGCCTACC TCACCTACGT CACCCCCGGC ATCCTGCTGT TCGGCATCCT CGGCTCGGTA
CAGGGCACCG CGATCACGGT GTCGATGGAC AAGACCGAGG GCATCATGGA CCGGTTCCGC
ACCATGGCGA TCTCCCGATC GTCCGTCCTC ACCGGACACG TCATCGGCAG TCTGATCCAG
ACCGTGCTGG GCACCGCGGT CGTCATGGCC GTCGCCGTGG CACTGGGATT CCGCAGCGAC
GCCACCCCGC TGGAATGGCT GGGCGTGCTC GGCGTGATGG TCATGGTCTC GTTCGCGTTC
ATCTGGATGT CGGTCCTGGT GGGGCTGATC GCCAAGACCG TCGAGTCCGC CAGCAACATC
CCGATGCCGC TGATGATGCT GCCGTTCCTG GGAAGCGGCT TCGTCCCCAC CGACACGATG
CCCGCCGGAC TGCGGACCTT CGCCGAGTAC CAGCCGTTCA CGCCGGTCAA CGAGACGCTG
CGCGGCCTGC TGCTGGGCAC CGAGATCGGC GACAGCGCCT GGCTCGCGGT CGCCTGGTGC
GCCGGTATCT CGCTGGTGTG CTTCCTGCTG GCCCGCCGCC GCTTCAACCG GCCGCAGACC
CGCTGA
 
Protein sequence
MSTYVIRDST AMLRRNIKKA IRYPSLTLMV IGMPIIFLVL FVYVFGSTLG DGLGGTSGGR 
DAYLTYVTPG ILLFGILGSV QGTAITVSMD KTEGIMDRFR TMAISRSSVL TGHVIGSLIQ
TVLGTAVVMA VAVALGFRSD ATPLEWLGVL GVMVMVSFAF IWMSVLVGLI AKTVESASNI
PMPLMMLPFL GSGFVPTDTM PAGLRTFAEY QPFTPVNETL RGLLLGTEIG DSAWLAVAWC
AGISLVCFLL ARRRFNRPQT R