Gene Snas_5578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5578 
Symbol 
ID8886793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5928002 
End bp5929438 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content69% 
IMG OID 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003514302 
Protein GI291303024 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGCA AAGCTTCCCC ACCCCCGTCA CGGCGGTGGA CGGCGCTGGC GCTGATCGCA 
CTGGCGCAGT TCATGGTCAT CATGGACACC TCGATCATCG GCGTCGCACT GCCGAAGATG
CAGAAGGAAC TCGGGTTCTC GCAGGAGAAC CTGTCGTGGG TGTTCAACGC CTACGTGGTG
GTGTTCGGCG GTCTGCTGCT GTTGGGCGGC AGGCTGTCCG ACCTGTTCGG CGCCCGCAGG
CTGTTCAGTC TCGGCTGGAT CGTGCTCGGC GCCGGATCCC TTGTGGCCGG TGTCGCCGGT
GACGTGCCGA CCGAGCTCAT CGGTCGCGGG GTCCAGGGCG TCGGCGCGGC GCTCATCGCG
CCCTCGGCGC TGACCCTGTT GATGATGCTG TTCGGCGCCA ACCCCAAGGA GCTGACCAAG
GCCTTCGCCG TCTACGGGGC CGCGGCCCCG GCCGGCGGCA CCGCCGGGGT GTTCCTCGGC
GGCCTGATCA CCGAGTACGC GTCCTGGCCG TGGGTCTTCT ACATCAACAT CCCGATCGCG
ATCCTCGCCC TGGCCGCCGC CCCCGCGTTG CTGCCCGGTG GTGCCCTGGC ACCCCGCGGC
TCCATCGACG TGGTCGGCGC GCTGACCGTC ACGCTGGGCC TGGGCGCGGC GGTGTTCGCC
ATCGTCCGTG CCCCCGAGAT CGGCTGGGGC GACCCGGCTA CCTGGGGCGT GCTGCTGCTG
GCGGCGGTGT TGCTGGTCGG GTTCCTGTTG TCGCAGGCCA GGAAGCGGCA GCCGCTGATG
CCGCTGTCGA TCTTCCGGGC CGCGAACCTC GCCGCGGCGA ACCTGGCGCA GCTGCTGCTG
GGCGCCGCCT GGATTCCGAT GTGGTTCTTC CTCAACCTGT ACCTGCAACA GGTTCTGGGT
TACTCGGCGT TCCCCTCGGG TGCGGCGCTG CTGCCGATGA CCGTGTTGAT CATGGTCGGC
ATGGTCGCGC TGGCCCCCCG GCTCATGGCC CGGTTCGGCG CCAAGGCGAT GATCGTCACC
GGTCTGGTCC TGCTCGCGGG CGGGCTGTAC TGGATGTCGT TCATCCGTCC CGACGGGAAC
TTCTGGGTCG ACGTCCTGCC CGCCTCGCTG CTGGCGGCGC TGGGCATGTC GCTGGCGTTC
ATCCCGTCAC TGCAGACGGC GATCTCGGCG GCGAAACCGG AGGAGGGCGG CCTGGCCTCG
GGCATCGTCA ACACCAGCTA CCAGATCGGC TCCGCGCTGG GGCTGGCCGT GGTCACGGCC
GTGGCCGCCG GTTACGGCGC CGACCGGCTG GGCGACAAGG TCGCGCTCAC CGACGGCTTC
TCGGTGGCGT TCATCGCCGC GGCACTCGTC GCGGCCGTGG CCGCCGTGCT GACGGTGGTC
ACCGTCCGAA CCCGGAAAGC CGCGGAAACC GAAACCAAAG TAGACAGTGT GGTGTAA
 
Protein sequence
MSRKASPPPS RRWTALALIA LAQFMVIMDT SIIGVALPKM QKELGFSQEN LSWVFNAYVV 
VFGGLLLLGG RLSDLFGARR LFSLGWIVLG AGSLVAGVAG DVPTELIGRG VQGVGAALIA
PSALTLLMML FGANPKELTK AFAVYGAAAP AGGTAGVFLG GLITEYASWP WVFYINIPIA
ILALAAAPAL LPGGALAPRG SIDVVGALTV TLGLGAAVFA IVRAPEIGWG DPATWGVLLL
AAVLLVGFLL SQARKRQPLM PLSIFRAANL AAANLAQLLL GAAWIPMWFF LNLYLQQVLG
YSAFPSGAAL LPMTVLIMVG MVALAPRLMA RFGAKAMIVT GLVLLAGGLY WMSFIRPDGN
FWVDVLPASL LAALGMSLAF IPSLQTAISA AKPEEGGLAS GIVNTSYQIG SALGLAVVTA
VAAGYGADRL GDKVALTDGF SVAFIAAALV AAVAAVLTVV TVRTRKAAET ETKVDSVV