Gene Snas_5568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5568 
Symbol 
ID8886783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5918059 
End bp5918724 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content68% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514292 
Protein GI291303014 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.982925 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGAGA CGACGGTGGC CGAGGTGACG GCCGAACTGG CCGCGCTGGA AGATCCCAAG 
GCCCGCGCGG TCAACGAGAA ACACGGCGAC GACCACGGCG TGAACCTCAG CAGACTGCGC
GCGCTGGCGA AACGGCTCAA GACCCAGCAG GAACTCGCCC GCCAACTGTG GGCGACCGAC
GACACCGCCG CCAAACTCCT GGCCCTGCTC ATCTGCCGCC CCAAGGCCTT CGAACGGGAC
GAACTCGACG CGATGCTGCG CCAGGCGCGC ACCCCCAAGG TGCACGACTG GCTCATCAAC
TACGTCGTGA AGAAGAACCC GCACACCGAG GAACTCCGCG CGGCCTGGTT CACCGACCCC
GACCCCGTCG TGGCCAGCGC GGGCTGGGCC CTGACGGCCG ACCGGGTGGC GAGGAACCCC
GAGGGCCTCG ACCTCGACAC CCTGCTCGAC CTCATCGAAG CGAAGATGAA GGACGCCCCC
GACCGTCTGC AATGGGCGAT GAACACCTGT CTGGCCCAGA TCGGGATCGA ACACGCCGAA
CACCGCGCCC GCGCCATCGA CATCGGCGAG CGGCTCGAAG TCCTCAAGGA CTACCCGACG
TCGCCGGGCT GCACCTCCCC GTTCGCTCCG ATCTGGATCA CCGAGATGGT GCGCCGAAGC
CAGTAG
 
Protein sequence
MAETTVAEVT AELAALEDPK ARAVNEKHGD DHGVNLSRLR ALAKRLKTQQ ELARQLWATD 
DTAAKLLALL ICRPKAFERD ELDAMLRQAR TPKVHDWLIN YVVKKNPHTE ELRAAWFTDP
DPVVASAGWA LTADRVARNP EGLDLDTLLD LIEAKMKDAP DRLQWAMNTC LAQIGIEHAE
HRARAIDIGE RLEVLKDYPT SPGCTSPFAP IWITEMVRRS Q