Gene Snas_5567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5567 
Symbol 
ID8886782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5917197 
End bp5917985 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content65% 
IMG OID 
ProductAbortive infection protein 
Protein accessionYP_003514291 
Protein GI291303013 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.531887 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAGAA CCGAAACCCC TCGCAGTGCT GGCGTGGTCA ACCGACTACT GAGCTCCCGT 
CATTCGCTAC CGCTGACCAT CGCGCTCCAC CTGCTCCCCG GCGTACCGAT CGTGGCCGCC
TACCTGGGCA TCGCCTCACC CGTCGTCGAC ATGCTGGGAT TGCCTCCCTA CCTGGGATGG
GTGATCGCCA TGTGCCTGGG CCTGGCACCG GTCCAACTCG GGCTGCTGGT GTTTCTCGGC
CGCCGCCGGA CCGGCCGGTT CTCCCTACGC GAAGTCGTGC TCTACCGAGA TCGGCCGACC
AAACGAGGCA GGCTCATCGG CCTCGTCCTG GCCCTGTTCG TGGGAGTGTT CGTCGCGTCC
TTCCTGCTGG CCCCGATCGA CACGGCCGTC CACGAGACGC TGTTCTTCTG GATCCCCTTC
GAGAACACCG GAGGCGGCGG TGGATTCGTC ACCGGATACC CGCGCCAGAC CGTGATCGTC
ACGTTGGCGG TGTGCGTCGT CCTGACCGGA GTTCTCCTCC CGATCGTCGA AGAGCTGTAC
TTCCGCGGGT TTCTGCTGCC CCGCATATCG CACCTCGGCC GGTGGGCGCC GGTACTGAAC
GCGACGCTGT TCTCGCTCTA CCACTTCTGG ACACCGTGGC AACTGGTCTC CCGGATCGGA
TACTTCCTGC CCACGGTGTG GGCGACATGG CGCAAAAAGG ACCTGCGGAT TTCGATATGG
GTCCACTGCG CCGCCAACTC GGTGCTCCAA CTGGCGGTAC TCACGGCGAT CATCCTCGGA
TACGCCTAG
 
Protein sequence
MSRTETPRSA GVVNRLLSSR HSLPLTIALH LLPGVPIVAA YLGIASPVVD MLGLPPYLGW 
VIAMCLGLAP VQLGLLVFLG RRRTGRFSLR EVVLYRDRPT KRGRLIGLVL ALFVGVFVAS
FLLAPIDTAV HETLFFWIPF ENTGGGGGFV TGYPRQTVIV TLAVCVVLTG VLLPIVEELY
FRGFLLPRIS HLGRWAPVLN ATLFSLYHFW TPWQLVSRIG YFLPTVWATW RKKDLRISIW
VHCAANSVLQ LAVLTAIILG YA