Gene Snas_5551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5551 
Symbol 
ID8886765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5899325 
End bp5900455 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content72% 
IMG OID 
Producthistidine kinase 
Protein accessionYP_003514275 
Protein GI291302997 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.476755 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.129441 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCCTGG TGGGTTTCCT CGGGCTGGTG TGGCTGGTGG AATCGCTGGC CGTCGTCCAG 
GACGCCGAAT ACTCGCTGGA CCGGCTCTTC GTCGGGATGG CGTGCCTGGT GTCCGGGCTC
GTGGCCATGG CGGTGGTGCT GTTCGCCGAG GGGCACCTGC CACAGTGGGC GCTTCCCGCC
GGTGGGTTGT CCATACTGGT CACCGCCGGG TGTTTCGTGA TCGATGGCGG CCAGGCCAAA
CCGGGCTTCG CCGAGACCGG TGCGCTGATC ATCCTGGTGG CGTGGACGTC GCGGCGTTTC
GACGCCCCGC GCGGCAAACT CGCCACCGGG CTGCTGATCG TGGCGCTGTT GCTGATGCCG
CTGCGGTTGA CGCAGGGCGT CAGACAGGGC GTCGCCTTCG AGTTCCTGAT CGTCATGTCG
ATCGCGGCGG CGCTGGCGCT GGGCGCCTAC CTGTACAGCG TGGACGCGCG GCGGCGGCGG
GCGATCGCGA CGGTGCGGCA CGGCGAGCGG CTGGAACTGG CCCGCGAACT GCACGACTTC
GTCGCCCACC ACGTCACCGG CATCGTGGTG CAGGCCCAGG CCGCGCAGTA CATCACCCAG
GACGATCCGG CCCGGGCCCG GGAATCCTTC GGCGCCATCG AGAAGGCGGG GCTGGAGGCG
CTGACGTCGA TGCGCAGGCT CGTCGACGTG ATGCGACAGG ACGACTCCGG TGCCGGGGCC
CGGCCGCTGG GCGATCTGGG GCAGACCGCC GAACTCGTCG ACCGGTTCCG GCACGGCGAC
GCCATCGCCA CCCTGTACGT GTCACCGGAA CTCACCCCCG AGACGCTGGC GCCGGAGACC
GCCGCCTCCG TCCACCGTAT CGTCCAAGAG GGACTGACGA ACGTCCGCAA GCACGCCGCC
GGGGTCAGCG CCGTCACCGT CGCGGTCGCG GCGGTCAACA GCGGCGTCGA GGTCACGGTG
CGCGACGACG GCGGCCCGGC CACCGGCAGC CGGCTGTCCG CCGTCGGCGG CGGCTTCGGA
CTGGAGGGGC TGCACGAACG CGCCACCGCG ATCGGCGGAC GGCTGCGCGC CGGACCGCGT
CCCGAGGGCG GCTGGGAAGT GGTGGCGACC CTGCCGCTGC GCAGCCCTTG A
 
Protein sequence
MCLVGFLGLV WLVESLAVVQ DAEYSLDRLF VGMACLVSGL VAMAVVLFAE GHLPQWALPA 
GGLSILVTAG CFVIDGGQAK PGFAETGALI ILVAWTSRRF DAPRGKLATG LLIVALLLMP
LRLTQGVRQG VAFEFLIVMS IAAALALGAY LYSVDARRRR AIATVRHGER LELARELHDF
VAHHVTGIVV QAQAAQYITQ DDPARARESF GAIEKAGLEA LTSMRRLVDV MRQDDSGAGA
RPLGDLGQTA ELVDRFRHGD AIATLYVSPE LTPETLAPET AASVHRIVQE GLTNVRKHAA
GVSAVTVAVA AVNSGVEVTV RDDGGPATGS RLSAVGGGFG LEGLHERATA IGGRLRAGPR
PEGGWEVVAT LPLRSP