| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5548 |
|---|
| Symbol | |
|---|
| ID | 8886762 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 5895526 |
|---|
| End bp | 5897178 |
|---|
| Gene Length | 1653 bp |
|---|
| Protein Length | 550 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | arginyl-tRNA synthetase |
|---|
| Protein accession | YP_003514272 |
|---|
| Protein GI | 291302994 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.598965 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0339829 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACTCCGC AGATTCTCGC CGAAAAGGTG CTGTCCGCCG CACGCGCGGC CTTCGACGCC
GCCGGTCTGG ACACCGGTGT GCTCCCCCAG ACGGCTACTG TGGAGCGACC CCGGGTCGCC
GAGCACGGTG ACTACTCGTC GAACATCAGC CTCCAGGTGG CCAAGAAGGC CGGGAAACCG
CCCCGCGAAC TGGCCGAGGC CATCGCCGCG AACCTGAGGG CGGTGGAGGG TATCGCCGCC
GTCGACATCG CCGGACCCGG CTTCCTCAAC ATCAAGCTGG ACGCCGCCGC GACCGGAGCC
GTCGCCGGGA AGATCATCGA AGCCGGGGAT ACTTACGGCC ACAATGATTC CCTGAATGGC
CAGAAGCTGA ACCTCGAGTT CGTCTCCGCC AACCCCACGG GTCCGATCCA CATCGGATCG
GTGCGCTGGG CCGCCGTCGG CGACGCCCTG GGCCGGGTCA TCTCCGCGTC CGGCGCCGAG
GTCACCACCG AGTACTACGT CAACGACGCC GGGGTCCAGA TGGACCTGTT CGGCGCCTCG
CTGCTGGCCG CCGCCAAGGG TGAGCCGGTG CCCGCCGACG GCTACCAGGG CGACTACGTC
AAGGACATCG CCAAGCAGAT CGTCGCCGAC CGGCCCGAGC TGCTGACGTC CGACGACCCC
CGGCAGGGCT TCCGGCAGGC GGGGCTCGAC CTGATGCTCG CCGAGATCAA GCGGTCGCTG
GCCGACTTCG GCGTCCACTT CGACGTCTAC TTCAGCGAGA AGCAGCTGCA CGACGGCGGC
GACATCGACG CCGCGGTGGC GAAGCTGACC GAACTGGGCG CCACCTTCGA GTCCGAGGGC
GCGCTGTGGC TGCGCACCAC CGACCACGGC GACGACAAGG ACCGGGTGCT GCGCAAGGAG
GACGGCACCT GGACCTACTT CGCCGCCGAC GCCGCCTACT ACCGCGACAA GCGGCAGCGG
GGCTTCGACC CGCTGGTGTA CATGCTCGGC GCCGACCATC ACGGCTACAT CGGACGGATG
AAGGCGCTGT CGGCCTGTTT CGGCGACGAC CCCAACGCCA CCATCGAGAT CCTCATCGGA
CAGTTGGTGA ACCTGAAGAA GGACGGCCAG CCGCTGCGGA TGAGCAAGCG GGCGGGCACC
ATCACCACGC TGGACGAGTT CGTCGCCGCG CTCGGCTCCG ACGCCGGACG CTACGCGCTG
GCCCGCTACT CCAGCGACTC CACCATCGAC CTCGACCTGG ACCTGTGGAC CAGCGCGTCC
AACGACAACC CGGTCTACTA CGTCCAGTAC GCGCACGCCC GGATCGCCTC GCTGCTGCGC
AACGCGGGCG AGCTGGGGCT GTCGCGCGGC GAGTCGTACG ACCCCAAGCT GCTCGACCAT
CCGCGCGAGT CCGACCTGCT CAAACAGCTG GCCGGGTTCC CCAAGGTGGT GGCCACCGCC
GCCGAACTGC GGGAACCGCA CCGCGTCGCC CGTTACGCCG AAGACCTCGC CGGGGCATAT
CACCGCTTCT ACGACGCCTG CCGGGTGCTG CCGCGCGGCG ACGAGGAGTT CACCGACACC
GGCGCCGCCC GGCTGTGGCT GGTGGAGGCG ACCCGCGTCG TGCTCGCCAA CGCGCTGCGG
CTGCTCGGTG TCTCAGCCCC GGAGCGTATG TAA
|
|---|
| Protein sequence | MTPQILAEKV LSAARAAFDA AGLDTGVLPQ TATVERPRVA EHGDYSSNIS LQVAKKAGKP
PRELAEAIAA NLRAVEGIAA VDIAGPGFLN IKLDAAATGA VAGKIIEAGD TYGHNDSLNG
QKLNLEFVSA NPTGPIHIGS VRWAAVGDAL GRVISASGAE VTTEYYVNDA GVQMDLFGAS
LLAAAKGEPV PADGYQGDYV KDIAKQIVAD RPELLTSDDP RQGFRQAGLD LMLAEIKRSL
ADFGVHFDVY FSEKQLHDGG DIDAAVAKLT ELGATFESEG ALWLRTTDHG DDKDRVLRKE
DGTWTYFAAD AAYYRDKRQR GFDPLVYMLG ADHHGYIGRM KALSACFGDD PNATIEILIG
QLVNLKKDGQ PLRMSKRAGT ITTLDEFVAA LGSDAGRYAL ARYSSDSTID LDLDLWTSAS
NDNPVYYVQY AHARIASLLR NAGELGLSRG ESYDPKLLDH PRESDLLKQL AGFPKVVATA
AELREPHRVA RYAEDLAGAY HRFYDACRVL PRGDEEFTDT GAARLWLVEA TRVVLANALR
LLGVSAPERM
|
|---|
| |