Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_5547 |
Symbol | |
ID | 8886761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 5894120 |
End bp | 5895526 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | diaminopimelate decarboxylase |
Protein accession | YP_003514271 |
Protein GI | 291302993 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.208469 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAGTAC ACGAAGCAGG CGCGCTGCAC GAGGAGTACA CCGGCGGCCA CGGCCCCGCG TGGCTGCGGA TGCCCGTCGA CGTCAACGAT CTGATCCCGC AGCTGTGGGC CCGCACCGTC AACCGTGACG ACGCGGGCGT GCTGACCGTC GGCGGCGTCG ACGTCAACAA GCTGGCCGCC GAGTTCGGCA CCGCCGCCTA CGTCGTCGAC GAGGCCGACT TCCGGTCCCG GCTGCGCGAC TTCCGCGGCT CCTTCAGCGC CAACTTCCCG GATGGAGCGG TGTACTACGC CGGGAAGTCG TTCCTGTGCA AGGCGGTGGC GCGCTGGGTT GCCGAGGAGG GCGTCAACCT CGACATCTGC ACCGGCGGCG AGCTGGCCAC CGCCGTGGCG GCCGGGTTCC CCGGTGAACG GCTGGCCTTC CACGGCAACA ACAAGTCCGA GGCCGAACTG GCCGCCGCCC TGGACGCCGG GGTCGGCACC ATCGTGCTGG ACTCCCGCAT CGAGGTCGAG CGGCTCACCC GGCTGGCCAA GCAGCGCGGC GTGCGGCCGG GCGTCATGGT GCGCACCAAG GTGGGCGTCG AGGCGCACAC CCACGAGTAC ATCGCCACCG CGCACGAGGA CCAGAAGTTC GGGCTGTCGC TGGAGGCGGC GGTGAAGGCG GCCAAGCACA TCCTGGCCGC CGACGTGCTG CACCTGAAGG GCCTGCACTC CCACATCGGT TCCCAGATCT TCGAGACCAC GGCCTTCGAG GTCGCGGCCC GCCGCGTCAT CGGCGCCCAC GAGCAGATCC AGCGCGAGAC CGGTAAGACG CTTCCGGAAC TGGGCCTGGG CGGCGGTTTC GGCATCGCCT ACACCACACA GGACGATCCA CAGTCGCCGA GGCAGCTGGC CGACGGACTG CGAAAGATCG TCGACCACGA GTGCGACAAC CTCGGCATCG ACATCCCGTC CATCACGGTG GAACCGGGCC GGGCCATCTC CGGGCCCACC ACGTTCACAC TGTATGAAGT GGGCACCGTC AAGTCGGTGG ACCTGGGCGC CGGACGGGTG CGCAGCTACG TCAGCGTCGA CGGCGGCATG AGCGACAACA TCCGCACCGC CATGTACGGC GCGACCTATT CGGTCACACT GGCCTCGCGG CTGTCGGACG CGCCGCCGAT CCTGGGCCGG GTCGTGGGCA AACACTGCGA GGCCGGAGAC ATCATCGTGC GGGACGAGTT CCTGCCCGGC GACATCAAAC CCGGTGACCT GATCGCGGTG CCCGGCACCG GCGCCTACTG CCGCAGCATG GCCAGCAACT ACAACCACGT CCCCCGGCCG CCGGTGGTCG CGGTCGCCGA CGGGACGGCG CGGCTCATCG TCCGCGGCGA GTCCGTCGAC GATCTGCTCA ATCTGGACGT CGGCTGA
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Protein sequence | MRVHEAGALH EEYTGGHGPA WLRMPVDVND LIPQLWARTV NRDDAGVLTV GGVDVNKLAA EFGTAAYVVD EADFRSRLRD FRGSFSANFP DGAVYYAGKS FLCKAVARWV AEEGVNLDIC TGGELATAVA AGFPGERLAF HGNNKSEAEL AAALDAGVGT IVLDSRIEVE RLTRLAKQRG VRPGVMVRTK VGVEAHTHEY IATAHEDQKF GLSLEAAVKA AKHILAADVL HLKGLHSHIG SQIFETTAFE VAARRVIGAH EQIQRETGKT LPELGLGGGF GIAYTTQDDP QSPRQLADGL RKIVDHECDN LGIDIPSITV EPGRAISGPT TFTLYEVGTV KSVDLGAGRV RSYVSVDGGM SDNIRTAMYG ATYSVTLASR LSDAPPILGR VVGKHCEAGD IIVRDEFLPG DIKPGDLIAV PGTGAYCRSM ASNYNHVPRP PVVAVADGTA RLIVRGESVD DLLNLDVG
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