Gene Snas_5535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5535 
Symbol 
ID8886749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5883277 
End bp5884017 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content70% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514259 
Protein GI291302981 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.249886 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGTCA TGATCGTCCT GCTGGCGCTG GGCGCGATAC TTGTCGGTCT TCTGGCTTTC 
CAGGCGAAGA AGAAGGCCGA TCGTCGCCTG GCCGATTCGC GGGAGGAGGC CCAGCGCTGG
TACGAGCGGC TGGGCGGACA GACGCTGAAC CTGGTGGCCG ACGGCGACAA CCCCGCCGCC
AAACAGGCCC TTGTGGACGC GAGCGAGCGT TACACCGCCG CCGGTGCCCA GCTGGAGCGG
GCGCAGTCGC GTCGGCAGTA CGAACTCGCC GCCGACACCG CCATCGAGGG GCTTCAGTAC
GTGAAGGCCG CCCGGCTGGC GATGGGGCTG GACGCGGGCC CGCACATCCC GCGGACCTCG
GGCCAGTTGC GGGCGGGTTC CGTCACCGAA CGCATGGAGG CCGATGTGGA CGGCCACCGT
TACGTGGCCA GCCCGACCCC CACCGACGAC GCCCGGCACT ACTACCCGGG TGGCATGGTC
AAGGGCCGTC CGGTGCCGGG CGGCTGGTAC TCCGAACCGT GGTGGAAGAC CGCACTGGTG
GCCGGTGCCT GGGGAATCGG CTCCATGATG GTCTTCGATG CCTTGATCTC GCCCGGTTTC
GGCACCGGTG CCGTCGACGG CGCTTACGCG GACGGTTACG CCGACGGGGC CTCGGACTAC
GGCAGCGGCG GCGACTACGC CGGTGGCGGC GATTTCGGTG GCGGGGACTT CGGCGGTGGC
GATTTCGGCG GCGGTTTCTG A
 
Protein sequence
MAVMIVLLAL GAILVGLLAF QAKKKADRRL ADSREEAQRW YERLGGQTLN LVADGDNPAA 
KQALVDASER YTAAGAQLER AQSRRQYELA ADTAIEGLQY VKAARLAMGL DAGPHIPRTS
GQLRAGSVTE RMEADVDGHR YVASPTPTDD ARHYYPGGMV KGRPVPGGWY SEPWWKTALV
AGAWGIGSMM VFDALISPGF GTGAVDGAYA DGYADGASDY GSGGDYAGGG DFGGGDFGGG
DFGGGF