Gene Snas_5517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5517 
Symbol 
ID8886731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5859892 
End bp5860704 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content62% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514241 
Protein GI291302963 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.894995 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCCA CAATCGAGAC CCCGGGCAAG GCCCGGGCCG CGATCTCGAA ACGCCATTTG 
CGAACCGACA ACTGGTGGCT GACGCCACTG CTGACGTTTC TGGGACTCGC CGGTTTTCTC
ATCTACGCGA CCGTCCGACT TTTCGTCGAC GGTTATTACT GGTCTCCGGA ACAGAGCTAC
CTGGCACCGT TCTATTCGCC GTGTCTGGCC ACGACGTGTA CCGAGGGTTC CAGCCACTTC
CTGGGCCAGC CGTTCGATCT GTCGGCGCTG CCGTCCTGGG TGAGCCCGGC GATGATCATC
CTGATCCTGC CCGGCGGTTT CCGCGCCACC TGCTACTACT ACCGCAAGTC CTACTACCGG
TCGTTCTGGG TGTCGCCGCC CGCATGCGCC GTCCCTGATG GACACAAGAA GTACACCGGC
GAGACCCGGT TCCCGCTGAT CTTCCAGAAC GTGCACCGCT ACTTCTTCTA CGCGGCGGTC
CTGGTGGGCG CGGTGCTGAC CTACGACGCG GGCATCGCCT TCTTCGACCA GGCCGGTGAC
TTCCGCGTCG GTGTCGGCAC CGTGATCCTG GTACTCAACG CGATCGCCAT CTGGGCGTAC
ACCCTCGGCT GCCACTCGTG CCGCAACATC GTCGGCGGCA GGCTGACCCA CTTCTCCAAG
CACCCGATCC GGTACTGGCT GTGGACGCAA GTGTCCAAAC TCAACAAACG CCATCAGTTC
TGGGCCTGGG TCTCCATGTT CTCCGTGGTG ATCGCCGACG CCTACGTGTG GATGGTTTCC
GCGGGCGTCT TCACCGATCT GACCATCATC TAG
 
Protein sequence
MTSTIETPGK ARAAISKRHL RTDNWWLTPL LTFLGLAGFL IYATVRLFVD GYYWSPEQSY 
LAPFYSPCLA TTCTEGSSHF LGQPFDLSAL PSWVSPAMII LILPGGFRAT CYYYRKSYYR
SFWVSPPACA VPDGHKKYTG ETRFPLIFQN VHRYFFYAAV LVGAVLTYDA GIAFFDQAGD
FRVGVGTVIL VLNAIAIWAY TLGCHSCRNI VGGRLTHFSK HPIRYWLWTQ VSKLNKRHQF
WAWVSMFSVV IADAYVWMVS AGVFTDLTII