Gene Snas_5513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5513 
Symbol 
ID8886727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5854800 
End bp5855861 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content67% 
IMG OID 
Productoligopeptide/dipeptide ABC transporter ATPase subunit 
Protein accessionYP_003514237 
Protein GI291302959 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.472941 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACTG AGGAATCCAC GTGGAGTGCC GACGCCGCCG GTGACTCGTT CGTGGCCGAC 
CTCCCCGGCT ACGACTCCGA TGCCCCACTG TTGACGGTGG AACAGCTACA GGTGGAGTTC
CACACTCGCG AGGGCATCGC CAAGGCCGTC AACGGTGTCG ACTTCACCCT CGACGAGTGC
CGCACGATGG CGATCGTCGG CGAGTCGGGC TCCGGCAAGA GTGTCACCTC GCAGGCCATC
ATGGGCATCC TCGACATCCC ACCGGCCAAG GTGGCCGGTG GCCGGGTGTT GTTCCGAGGC
GTGGACCTGT TGAAGCTCAA GCCAAAGGAC ATGCGCCGGG TGCGGGCCAA CCACATCGCG
ATGGTGTTCC AGGACGCGCT GTCCGCTTTG AACCCGGTGT GGACGGTCGG CTACCAGCTC
GGCGAACTGT TCCGTGTCCA CAGAGGAACA TCTCGCGCGG AGGCGAAACG CCGGGCGATC
GAACTGCTCG ACCTGGTGCG GATCCCGGCC GCGCGGCAGC GCGTCGACGA GTACCCGCAC
CAGTTCTCCG GCGGTATGCG GCAGCGCGTC ATGATCGCGA TGGCCCTGGC ACTCGACCCC
GAGATCCTGA TCGCCGACGA ACCCACGACC GCGCTGGACG TGACGGTGCA GGCCCAGATC
ATGCGGCTGC TGGGCGACAT CCAGGCCGAA CGGAACATGG GGCTGATCCT CATCACCCAC
GACCTGGGTG TGGTCGCCGA CGTCGCCGAC GACGTGACCG TCATGTACGC GGGCCGCGCG
GTCGAGCAGG CCGGGATCGA CGAGATCTTC GAAGCGCCGG CCCACCCGTA TACGAAGGCG
CTGTTGCGTT CGATTCCGCG CCTGGACGTC AAGGGACAGC GGCTGGAGGT CATCGCGGGT
CTACCGCCGG TGCTGACGAA CATCCCGCCC GGCTGCGCCT TCGCGCCGCG CTGCCACTAC
GCCCAGGACA TGTGCACCCG GGCCGTCCCG CCGCTGGCGC CGGTGGATCC GGGCCGCACG
GCCGCCTGCT ACTTCGCCCA GGAGGTCAAG AACGATGTCT GA
 
Protein sequence
MSTEESTWSA DAAGDSFVAD LPGYDSDAPL LTVEQLQVEF HTREGIAKAV NGVDFTLDEC 
RTMAIVGESG SGKSVTSQAI MGILDIPPAK VAGGRVLFRG VDLLKLKPKD MRRVRANHIA
MVFQDALSAL NPVWTVGYQL GELFRVHRGT SRAEAKRRAI ELLDLVRIPA ARQRVDEYPH
QFSGGMRQRV MIAMALALDP EILIADEPTT ALDVTVQAQI MRLLGDIQAE RNMGLILITH
DLGVVADVAD DVTVMYAGRA VEQAGIDEIF EAPAHPYTKA LLRSIPRLDV KGQRLEVIAG
LPPVLTNIPP GCAFAPRCHY AQDMCTRAVP PLAPVDPGRT AACYFAQEVK NDV