| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5507 |
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| Symbol | |
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| ID | 8886721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 5847233 |
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| End bp | 5848981 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_003514231 |
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| Protein GI | 291302953 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.553842 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.243799 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAAGT CACTGGCGAC AGTCGGTGTA CTCGCCTTGA TGGTGAGCAC CGTCGCCGCC
TGTAGCTCGA ATGAAGGCGG GAAGGACGAA GGCACCAAGG ACTTCGAGGT CAAGCCCGCT
GTCATCAGCA AGGATGCCAA GGATTCCGAG GGTCCGGCCA GCGAGGTCAA GGGTGCCCAG
ACAGGCGGGG AGGCCACCTA TCTGGCCCCC ACGACCTTCG ACCACCTTGA CCCTCGTCAG
ACCTACTACG TCAACACCCT TGAGATCGGC CGCCTGTTCT CCCGTCAGCT GACCAGCTAC
CGGGTGATGG GCGAGGAGAC CAAGGTCGTC GGCGACCTCG CCACCGGTCC CGGTAAGGAC
CTCGGCGACT GCAAGGCCTG GGAATACGAG CTCAAGGACG GCCTGAAGTA CGAGGACGGT
TCGCCGATCA AGGCCGACGA CATCGCCTAC GCGATCTCCT CGACCTTCGA CAGCCGACTG
CAGGACGGTC CCTCGTCCTA CTTCCGTGGC TGGCTGAAGG GTGCCGAGAA GTACAAGGGC
CCGTTCAAGG ACAAGGGTTC CCGCGCTCCG GGCATCAAGG TCGACGGTGA CAACAAGATC
ACCTTCGAGC TGAGCTCCCC GCACTGCGAC CTGCCGTACA TGGCGGCCAT GAGCGTCACT
TCTCCGCTGC CGGAGAAGAA GGAGGCCAAG AACCCGGCCG ACTACGACTT CAAGCCGTTC
TCCTCGGGCC CGTACAAGTT CGAGGGCAAG TGGAGCGAGA ACAAGGGCGT CACCCTCGTC
AAGAACGAGA ACTGGGACCC CAAGACCGAC CCGATCCGTC ACCAGTACGT CGACACCTTC
AAGGTGAACT TCGGTGACAA CCACAAGGCC ACCACTGACG CGCTGCGTGC CGACAAGGGC
GCGGACGCCA CGTCGATGAC CGACACGGTC GACATCAACC AGGTCCCTGA GATCGTCAAG
GACAAGGAAC TGATGAAGCG GGTCGAGAAC GTCCCGGGCA TCTTCGTGTA CTGGATGGGC
ATCAACAACA TGAAGATCAA GGACCCCGAC GTCCGCAAGG CGCTGGCGTA CGCGGTCGAC
AAGGAGGCCA TCGTCAAGGC CACGGGTGGA TCGAGCCAGG CCACGCCCGC CTCGACGACC
CTGAGCCCGA CCGTCGCCGG TTACGAAGAC CAGATGGACA TGTACAAGGG TCCGAAGGGC
GACAAGAAGA AGGCCAAGGA GCTGCTCAAG GGCAAGGACG TCAAGTCGCT GACGTACGCC
TACCGTGCCA GCCCCGCCAA CAAGAAGATC GCCTCCTCGC TGCAGGACCA GCTCAAAGAG
GTCGGCATCG AGCTGAAGAT CAAGGAGCTG AGCGAGACCG AGGCTCCGTC GATCCTGAGC
GACCCGCAGG AGAACAAGTA CGACCTGTAC ATGAAGAACT GGGGTGCTGA CTGGCCCACC
GGTTACAGCG TGCTGCAGCC GATCTACGAC GGCCGCACCA TCACTGACGA CCCGGGCAAC
GTCAACAACA TCTGGTTCGA CGAAAAAGAG GTCAACGACC AGATCGACAA GGTCATGAAC
ATGACCGACC CCGAGGAGCA GAACAAGGCC TACATGGATC TCGACAAGAA GATCCTGGAG
GAGTACATGC CGATGGTCCC GCTGTACTAC AGCAAGACCT TCGCGATGCA CGGTTCCAAG
GTGGGCGGTC TCTACTCGAC CAACACCACT GGTACCACCT CGTTCACCGA CGTCTTCGTC
AAGTCGTAA
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| Protein sequence | MRKSLATVGV LALMVSTVAA CSSNEGGKDE GTKDFEVKPA VISKDAKDSE GPASEVKGAQ
TGGEATYLAP TTFDHLDPRQ TYYVNTLEIG RLFSRQLTSY RVMGEETKVV GDLATGPGKD
LGDCKAWEYE LKDGLKYEDG SPIKADDIAY AISSTFDSRL QDGPSSYFRG WLKGAEKYKG
PFKDKGSRAP GIKVDGDNKI TFELSSPHCD LPYMAAMSVT SPLPEKKEAK NPADYDFKPF
SSGPYKFEGK WSENKGVTLV KNENWDPKTD PIRHQYVDTF KVNFGDNHKA TTDALRADKG
ADATSMTDTV DINQVPEIVK DKELMKRVEN VPGIFVYWMG INNMKIKDPD VRKALAYAVD
KEAIVKATGG SSQATPASTT LSPTVAGYED QMDMYKGPKG DKKKAKELLK GKDVKSLTYA
YRASPANKKI ASSLQDQLKE VGIELKIKEL SETEAPSILS DPQENKYDLY MKNWGADWPT
GYSVLQPIYD GRTITDDPGN VNNIWFDEKE VNDQIDKVMN MTDPEEQNKA YMDLDKKILE
EYMPMVPLYY SKTFAMHGSK VGGLYSTNTT GTTSFTDVFV KS
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