Gene Snas_5498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5498 
Symbol 
ID8886712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5839955 
End bp5840782 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content67% 
IMG OID 
Productpeptidase S1 and S6 chymotrypsin/Hap 
Protein accessionYP_003514222 
Protein GI291302944 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000964373 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGAAGA AGACAAAGCG GCTGGCCGCG GTGGGCGCTG CCCTCGCGGC GGGCGCTCTC 
GCCGTCGGCG TCTCCCTCCC GGCACTAGCC GCCGACACTG ACAAGAGCAA CGGTCCTGAG
GAAAAGGTCG TCGGTGGCGA GCCCGCCGAA GAAGGCGAAT TCCCGTTCAT GATGCGGCTG
ACGATCGGTG GCCAGGACGC CTGTGGCGCC TCGCTGATCC GTCCGGACGT CGCGCTGACC
GCGGCGCACT GCACCGACGG CAGCGAGGGC TTCACCGTCA AGTACGGCAC CAACAAGCTC
GACGACCCTG AGATCAAGGA AATCAAGGTC ACCGAGGTCA CCCAGAACCC CGACTTCGGC
AAGCCGATCG AGATGGCCGG TGACTGGTCG GTCCTGAAGC TCGAGGCTCC GGCCGAGGGC
GTCGAGCCGG TCAAGCTGGC CGAGGACGAC AGCGTCGACC TGGAAGAGCA GACCATCATG
GGATGGGGCG CCACCTCCGA GGGCGGCGAG CAGTCCAACG AGCTGCTGAA GGCCAAGGTT
CCGGGCGTCG ACGACGAGAA GTGCAAGGAA GCCTACGGCG AGTCGCTCGA CCCCGACTCG
ATGCTGTGTG CCGGTCTTGA CGAGGGCGGC ATCGACACCT GCCAGGGCGA CTCCGGTGGC
CCGATGGGCG TCGTCGCTGA GGACGGCACC TTCACCCAGA CCGGCATCGT CAGCTGGGGC
GAGGGCTGCG CGCAGCCCAA GAAGTTCGGC GTTTACGCCC AGGTGAGCAC CCTGGCCGCC
GACATCAACG CCGCGGCCGA CGCGTTCGGT GGCGGGGAAG AAGGCTAA
 
Protein sequence
MQKKTKRLAA VGAALAAGAL AVGVSLPALA ADTDKSNGPE EKVVGGEPAE EGEFPFMMRL 
TIGGQDACGA SLIRPDVALT AAHCTDGSEG FTVKYGTNKL DDPEIKEIKV TEVTQNPDFG
KPIEMAGDWS VLKLEAPAEG VEPVKLAEDD SVDLEEQTIM GWGATSEGGE QSNELLKAKV
PGVDDEKCKE AYGESLDPDS MLCAGLDEGG IDTCQGDSGG PMGVVAEDGT FTQTGIVSWG
EGCAQPKKFG VYAQVSTLAA DINAAADAFG GGEEG