Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_5483 |
Symbol | |
ID | 8886697 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 5823502 |
End bp | 5825463 |
Gene Length | 1962 bp |
Protein Length | 653 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | Radical SAM domain-containing protein |
Protein accession | YP_003514207 |
Protein GI | 291302929 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTAA CCTCCGTATA TCCGCAGCTT GAATCGCTGC TGCCTCAGGT GGGCAAGCCT ATCCAGTACG TCGGCGGTGA GCTGGGGGCT GTCGTCAAGG ACTGGGACGA GGCTACGGTG CGCTGGGCGC TGATGTACCC CGACGCTTAC GAGGTCGGTG TTCCGAACCA GGGTATCCAG ATTCTCTACG AGGTGCTCAA CGAACGCGCC GACGCGTTGG CCGAGCGCAC CTATTCGGTG TGGCCGGATC TGGAGAAACT GATGCGGGAG AACGATGTCC CGCAGTTCAC CGTCGACGCG CACCGTCCGG TGGGCGCCTT CGACGCCTTC GGGGTCTCGT TCGCCACCGA GATGGGCTAC ACGAACCTGC TCACCGCGCT GGACCTGGCG GGCATTCCGC TGTCGGCGGC CGACCGGGAC GAATCCCACC CGGTCGTGGT GGCCGGTGGC CACGCGGCCT TCAACCCGGA GCCGATCGCC GAGTTCATCG ACGCCGCGGT GCTGGGCGAC GGCGAGGAGG CCGTCGGCGA GATCACCGAC ATCATCCGGG ACTGGAAGAA CGAGGGCCGT CCCGGTGGCC GCGACGAACT GCTGCTGCGC CTGGCCCGCA CCGAGAGCAT CTACGTCCCC CGCTTCTACG ACGTCGACTA CCTTCCCGAC GGCCGGATCC GGCGAGTGGT CCCCAACCGC GCCGACGTCC CGTTCCGGGT CCACAAGCGA ACCACAATGG ACCTCGACGC CTGGCCGTAC CCGAAGAAGC CGCTGGTGCC GCTGGCCGAG AGCGTGCACG AACGCTACGC GGTGGAGATC TTCCGCGGCT GTACCCGTGG CTGCCGGTTC TGCCAGGCGG GCATGATCAC CCGCCCGGTG CGGGAACGCT CCATCACCAC CATCGGCGAG ATGGTCCACA AAGGCATCGA GGAGTCGGGC TTCAACGAGG TCGGGCTGCT GTCGCTGTCC AGCGCCGACC ACTCCGAGAT CGCCGACGTG TGCTCGGGCC TGGCCGACCG CTACGAGGGC GAGAACGTCT CGCTGTCGCT GCCGTCCACC CGCGTCGACG CCTTCAACGT CGACCTCGCC AACGAACTGT CCCGCAACGG ACGCCGCTCC GGCCTGACCT TCGCCCCCGA GGGCGGCAGC GAACGCATCC GCCGCGTCAT CAACAAGATG GTCAGCGAGG AAGACCTCAT CAACACCGTC GTCACGGCCT ACGGCAACGG TTGGCGGCAG GTGAAGCTGT ACTTCATGTG CGGCCTGCCC ACCGAGACCG ACGAGGACGT CGTCGGCATC GCCGACATGG CGCACAAGGT GATCAAGGCC GGACGCACGG CCTCCGGCCG CAGCGACATC CGCTGCACCG TCTCCATCGG AGGGTTCGTT CCGAAGCCGC ACACCCCGTT CCAGTGGGCC GCCCAGACCG ACGCCGAGAC CGTCGACCGG CGGCTGAAGT TGCTCAAGGA CGCCATCAAC TCCGAGAAGT CCCTGGGCCG CGCCATCGGT TTCCGCTACC ACGACGGCCG CCCCTCGCTC ATCGAGGGAC TGCTGTCGCG CGGCGACCGC CGCCTGTCGG GCGTCATTCG CAAGGTGTGG GAGGAGGGCG GTCGCTTCGA CGGCTGGAGC GAACACTTCT CCTACGAGCG CTGGTACGAC GCCGCCGAGG CCGTCCTGCC CGAACACGGC GTCTCGTTCG CCTGGTACAC CACCCGCGAA CGCGACGAGA ACGAAGTGCT GCCCTGGGAC CACCTCGACT CCGGCCTCGA CAAGGACTGG CTGTGGTCGG ACTGGCAGGA CGCGATCTCC GAGGTCGAAC TCGACGACTG CCGCTGGACC CCGTGCTTCG ACTGCGGCGT CTGCCCCGCC ATGGACACCG AGATCCAGAT CGGCCCCACC GGCAGGAAGC TGCTGCCGTT GAGCGTCGCG GGCGCCGACT CCCGTCCGGT CTCGGCGGTG AGCGGACAGT GA
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Protein sequence | MSVTSVYPQL ESLLPQVGKP IQYVGGELGA VVKDWDEATV RWALMYPDAY EVGVPNQGIQ ILYEVLNERA DALAERTYSV WPDLEKLMRE NDVPQFTVDA HRPVGAFDAF GVSFATEMGY TNLLTALDLA GIPLSAADRD ESHPVVVAGG HAAFNPEPIA EFIDAAVLGD GEEAVGEITD IIRDWKNEGR PGGRDELLLR LARTESIYVP RFYDVDYLPD GRIRRVVPNR ADVPFRVHKR TTMDLDAWPY PKKPLVPLAE SVHERYAVEI FRGCTRGCRF CQAGMITRPV RERSITTIGE MVHKGIEESG FNEVGLLSLS SADHSEIADV CSGLADRYEG ENVSLSLPST RVDAFNVDLA NELSRNGRRS GLTFAPEGGS ERIRRVINKM VSEEDLINTV VTAYGNGWRQ VKLYFMCGLP TETDEDVVGI ADMAHKVIKA GRTASGRSDI RCTVSIGGFV PKPHTPFQWA AQTDAETVDR RLKLLKDAIN SEKSLGRAIG FRYHDGRPSL IEGLLSRGDR RLSGVIRKVW EEGGRFDGWS EHFSYERWYD AAEAVLPEHG VSFAWYTTRE RDENEVLPWD HLDSGLDKDW LWSDWQDAIS EVELDDCRWT PCFDCGVCPA MDTEIQIGPT GRKLLPLSVA GADSRPVSAV SGQ
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