Gene Snas_5482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5482 
Symbol 
ID8886696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5822741 
End bp5823505 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content71% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514206 
Protein GI291302928 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.276592 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCCCA AGAAGCAACC CGAACCGCAG GAACCGGCGG TGCAGCGGCT GCGGATCCGC 
TACACCAAAC GCGGCCGGCT GCGGTTCACC TCGCACCGCG ACTTCGCCCG CGCCCTGGAG
CGGGCGCTGC GCCGCGCCGG GGTCCCGATC GCCTACTCGT CCGGCTTCCA CCCGCACCCC
CGGGTGTCCT ACCAGTCGGC GGCGCCCACC GGCGTGGCCA GCGAAGCCGA GTACGCCGAG
CTGGCGCTGC GCCGCGAGGC CGACTGCGAC GAGATGGCCA AGGCCCTGGA CGCCGCGCTG
CCCGATGGTC TCGACATCCT GGAGGTCGTC GAGGCCCGCA CCAGCGGCTT CGCCGACCGG
ATGGAGGCCT CGCACTGGCG TATCGAGCTG CCCGAGCTCG AACCGGAGCG TCTGGACGCG
GCGGTCGCGG CGTTCCTGGC CGCCGAGACG GTCACCGTCA CCCGGCTGAC CAAGAAGGGC
AACCGCGCCT TCGACGCGAG AAACGCCGTG GTCAGCGCCA AGACCGAGCC GGTTGCCGGG
CCCGCTTCAG CCAGGTGTGC CATACTCGAC CTTGTCGTGC GGCAGGTGAC ACCTGCGGTA
CGGCCCGATG ACGTCTTGTC CGGGTTGTCG CTGGTAGCGA ACTTGGAGCT GCCGGTGCCA
CCCCGAGTCA CCCGGCTAGC ACAGGGGCCG CTGACGGAGT CCGGTGACAT CGCCGATCCT
CTCCACGCGG ATCGTGTACA TCCGCGTGTC AGCGCCGGTG AGTGA
 
Protein sequence
MSPKKQPEPQ EPAVQRLRIR YTKRGRLRFT SHRDFARALE RALRRAGVPI AYSSGFHPHP 
RVSYQSAAPT GVASEAEYAE LALRREADCD EMAKALDAAL PDGLDILEVV EARTSGFADR
MEASHWRIEL PELEPERLDA AVAAFLAAET VTVTRLTKKG NRAFDARNAV VSAKTEPVAG
PASARCAILD LVVRQVTPAV RPDDVLSGLS LVANLELPVP PRVTRLAQGP LTESGDIADP
LHADRVHPRV SAGE