Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_5481 |
Symbol | |
ID | 8886695 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 5820349 |
End bp | 5822502 |
Gene Length | 2154 bp |
Protein Length | 717 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | ribonuclease Rne/Rng family |
Protein accession | YP_003514205 |
Protein GI | 291302927 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0824918 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGACG ACGATTCCAA TCGGCAGCGG GTTCAGCCCG CGCCCCTTCT GTTCGTCGCT CCGCAAGCCC AGGCGGCCCC ACCGCCGCCG GCGCGCACCG AGAGCGACTC CACCGAGACC GAGGAGACCG GGGTGAAGCG GCGCCGCCGC TCCCGGTCCC GCAGCGGTGG CGGCAACGAA GCGGCCGAGG CCGAGGAAAC CCAGCAGACC GACGACGAGC CCCAGGCCCC GACCCGGCGC CGCACCCGCA AACGCGGCGC CGAGCGTGAG ACCGCCGCCC CCGAGGCCGC CGAGCCCGAA GCCGAGGACG ACGGCGACGA CGACGAGACC GCCCGCGGCA AACGCGGCCG CCGGGGCCGT CGCGGCCGGG GCCGTGGCAA GGGCACCGGC GCCGACGGCG GCGACACCGA GGACACGCCG GGTCAGGACG ACGACGAGCA GCAGCCCGCC GCCGACACCG ACGCCGACGG GGTGACACGC CGACGTCGCC GCCAGCGCAA ACGCGCGGGC AGCGCGAGCG ACAAGAGCGC CGCCGACAGC GACGGCAAGA CCGAGGTCGT GGTCAAGGTC CGCAAGGCCC GCGAGGTCTC CGGCGACGAC GTCCAGGGCC TGTCCGGCTC CACCCGGCTG GAGGCCAAAC GGCAGCGCCG TCGCGAAGGC CGTGGCCAGC GCCGCACCCG CCCGCAGGTC ATCAGCGAAT CCGAGTTCCT GGCCCGCCGC GAATCCGTGG CCCGCACCCT GGTGGTGCGC GGACACGGCG ACCGCACCCA GATCGCGGTC CTGGAGGACG ACCTGCTCGT CGAGCACTTC GTCACCCGCG CGGGCGGCCA GGGCATGGCG GGCAACGTCT ACCTGGGCAA GGTCCAGAAC ATCCTGCCCA GCATGGAGGC CGCGTTCATC GACATCGGCC GGGGCCGCAA CGCCGTCCTG TACGCGGGCG AGGTCAACTG GGACCGCACC GGCCTGTCGG GACGCACCCG CACCATCGAG CAGGCCATGA ACGCCGGCGA CTCGGTGCTG GTCCAGGTCA CCAAGGACCC GGTCGGCCAC AAGGGCGCCC GCCTGACCAG CCACATCGCG CTGTCCGGCC GCCACCTCGT CTACGTGCCG CACGGCAACG CCTCGGGCAT CTCGCGCAAG CTCCCGGACT CCGAGCGCCG ACGGCTGCGC AGCACGCTCA AGAAGCTCGT CCCCGAGGGC GCGGGCGTCA TCGTCCGCAC CGCGGCCGAG GGCGCCGACA CCGACGACCT CGAACGCGAC ATCGCCAGGT TGCAGAGCGA GTGGGAGGCC ATCGAGGCCA AAGCGGCGAA GGGCGGCGCC CCGGCATTGC TGCACGCCGA ACCCGACCTG CTCGTCCGCG TCGTCCGCGA CGTCTTCAAC GAGGACTTCA ACGAGGTCAT CGTCGACGAC GACGCCGCCT ACGCCGAGGT CGAGAAGTAC CTCAGCTCCG TCTCGCCCGA CCTGGTGTCC CGGCTGAAAC GGCACACCGG CACCGGCGAC ATCTTCGCCG AACAGCGCGT CGACGAACAA CTGCTCAAGG CGCTGGACCG CAAGGTGTTC CTGCCCTCGG GCGGTAGCCT CGTCATCGAC CGCACCGAGG CGATGACGGT CATCGACGTC AACACCGGCA AGTTCACCGG CGCGGGCGGC AACCTCGAGG AGACCGTCAC CCGCAACAAC CTGGAGGCGG CCGAGGAGAT CGTCCGGCAG CTGCGGCTGC GCGACATCGG CGGCATCATC GTCATCGACT TCATCGACAT GGTGCTGGAG AGCAACCGGG ATCTGGTGCT GCGGCGCCTG ACCGAATGCC TCGGCCGGGA CCGCACCAAG CACCAGGTCA CCGAGATCAC CTCGCTCGGG CTGGTCCAGA TGACCCGCAA ACGCGTGGGT CAGGGCCTGC TCGAGGCCTT CAGCGAACCC TGCGAACACT GCAAGGGCCG CGGTGTCATC GTCGACACCG ACCTGTCGGG CAACTTCGCC AACGCCAAAC CGGAGAAGAG CAACAACGGC AAGGCCGAGG GCAAGAGCGG CAAGAAGAAG GAAAGCAAGA ACGCCAACAA GGGAAAGTCC GTCAGCGAGG TGGCCAAATC GGCCGCTGAG CAGACCCGCA AGATCGCCGA GGCCAGCACC ACGAACGGTC AAGCGGCGGC TTGA
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Protein sequence | MHDDDSNRQR VQPAPLLFVA PQAQAAPPPP ARTESDSTET EETGVKRRRR SRSRSGGGNE AAEAEETQQT DDEPQAPTRR RTRKRGAERE TAAPEAAEPE AEDDGDDDET ARGKRGRRGR RGRGRGKGTG ADGGDTEDTP GQDDDEQQPA ADTDADGVTR RRRRQRKRAG SASDKSAADS DGKTEVVVKV RKAREVSGDD VQGLSGSTRL EAKRQRRREG RGQRRTRPQV ISESEFLARR ESVARTLVVR GHGDRTQIAV LEDDLLVEHF VTRAGGQGMA GNVYLGKVQN ILPSMEAAFI DIGRGRNAVL YAGEVNWDRT GLSGRTRTIE QAMNAGDSVL VQVTKDPVGH KGARLTSHIA LSGRHLVYVP HGNASGISRK LPDSERRRLR STLKKLVPEG AGVIVRTAAE GADTDDLERD IARLQSEWEA IEAKAAKGGA PALLHAEPDL LVRVVRDVFN EDFNEVIVDD DAAYAEVEKY LSSVSPDLVS RLKRHTGTGD IFAEQRVDEQ LLKALDRKVF LPSGGSLVID RTEAMTVIDV NTGKFTGAGG NLEETVTRNN LEAAEEIVRQ LRLRDIGGII VIDFIDMVLE SNRDLVLRRL TECLGRDRTK HQVTEITSLG LVQMTRKRVG QGLLEAFSEP CEHCKGRGVI VDTDLSGNFA NAKPEKSNNG KAEGKSGKKK ESKNANKGKS VSEVAKSAAE QTRKIAEAST TNGQAAA
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