Gene Snas_5468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5468 
Symbol 
ID8886679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5800657 
End bp5801616 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content70% 
IMG OID 
ProductDNA polymerase III subunit delta 
Protein accessionYP_003514192 
Protein GI291302914 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.934031 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAGA CGGTATCGGG AATGCGGCTG GTGCTCGGCG AGGAAGAGCT GCTCGCCGAA 
CGGGCGGTGG CCGCGATCGT CGCCGAGGCC CGGCAGCGCG ACGCGGGCAT TCAGGTTCAT
CGTGCCGACG CCGGGGACCT CAGTCCCGGG GAGCTGACGA CGTTGACCAG CCCGACGTTG
TTCGGCGGCG GCAGTGTCGT GGTGGTGGAG AACGCCCAGG ACGCGAAGAA GGAGCTGGCC
GCCGCCCTGA ACGGGTATCT GGACGCTCCG GCGGCCGATG TCGAGGTCGT GGTCGTGCAC
GCGGGCGGCA ACAAGGGCAA GGCCTTGGCC GAGTCGCTGC GTAAGGCCGG GGTGGAGGTG
ATCTCGGCGG CGAAGATCAA GCGGGCCACC GATCGCGCCA ACTTCGTGAA GGAGGAGTTG
CGTCGGCTGG GGGCTCGCGC CAACGCGGCC GCCGCGGAGG CTTTGATCAC CGCCGTGGGG
CATGACCTGC GTGAGTTGGC CAGTGCCTGT TCGCAGTTGG TGGCCGACAC CGGGGGCAAG
GTCACCGTTG ACGAGATCAA CAAGTACTAC CGGGGACGGG CTGAGGTGAC GGGGTTCGCC
GTGGCCGACG CCGCGGTGAC CGGTGACGCC CAGGCGGCGT TGAGCGGGTT GCGGTGGGCG
TTGTCGGTGG GGGTGGACGC GGTGCCGTTG GCCGACGCGC TGGCCACCGG CGTGCGCAAT
ATCGCCAAGG TCGCGGGGGC CAGGGAGAGC GGTTATCAGC TGGCTTCCAA GGTGGGGATG
GCGCCGTGGC AGGTCGACAA GGCCAAGCAG CAGGGACGGG GCTGGACGCC GGAGGGGCTG
GTCGCGGCGA TGGACGTCAC CGCCGAGCTC AACGCGGCGG TCAAGGGCGG GTCCGAGGAC
CGGGCCTATG CGCTGGAGCG GGCGATCCTG GCGATCACGG CCGCGCGTTC GGGGCGGTAG
 
Protein sequence
MAKTVSGMRL VLGEEELLAE RAVAAIVAEA RQRDAGIQVH RADAGDLSPG ELTTLTSPTL 
FGGGSVVVVE NAQDAKKELA AALNGYLDAP AADVEVVVVH AGGNKGKALA ESLRKAGVEV
ISAAKIKRAT DRANFVKEEL RRLGARANAA AAEALITAVG HDLRELASAC SQLVADTGGK
VTVDEINKYY RGRAEVTGFA VADAAVTGDA QAALSGLRWA LSVGVDAVPL ADALATGVRN
IAKVAGARES GYQLASKVGM APWQVDKAKQ QGRGWTPEGL VAAMDVTAEL NAAVKGGSED
RAYALERAIL AITAARSGR