Gene Snas_5465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5465 
Symbol 
ID8886676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5797203 
End bp5799059 
Gene Length1857 bp 
Protein Length618 aa 
Translation table11 
GC content65% 
IMG OID 
ProductGTP-binding protein LepA 
Protein accessionYP_003514189 
Protein GI291302911 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACTTCG CGCCCGGCGC CACTGACCCG CAGCGGATCC GAAACTTCTG CATCATCGCC 
CACATCGACC ACGGAAAGTC GACGCTGGCC GACCGGATGC TGCAGATAAC CGGTGTCGTC
GAGCAGCGCA AGATGCGAGC CCAGTACCTC GACCGGATGG ACATCGAGCG CGAGCGCGGC
ATCACGATCA AGAGCCAGGC CGTGCGGATG CCGTGGAAGG CCCGCAGCGG CGACAGCACC
GGTGACGAGT TCGTCCTCAA CATGATCGAC ACCCCCGGCC ACGTCGACTT CACCTACGAG
GTGTCCCGGT CGCTGGCGGC CTGCGAGGGC GCGATCCTGC TGGTGGACGC CGCGCAGGGC
ATCGAGGCGC AGACGCTGGC GAACCTGTAC CTGGCGCTGG ACAACGACCT GACGATCATC
CCGGTGCTCA ACAAGATCGA CCTGCCCGCC GCGCAGCCCG AACGCTACGC CGAGGAACTG
GCGCACCTGA TCGGCTGTGA ACCCGAGGAC TGTTTCAAGG TGTCGGGCAA GACCGGCCAG
GGTGTCGAGG AACTGCTCGA CGCGATCGTG CACCAGTTCA CGCCCCCGGT CGGTGACGCC
GACGCCCCGG CCCGCGCCAT GATCTTCGAC TCGGTGTACG ACACCTATCG CGGCGTCGTC
ACCTACGTGC GGGTCATCGA CGGCAGTTTG TCGGCGCGCG AGCGCATCAA GATGATGTCG
ACCGGCGCGG TGCACGAGCT GCTGGAGATC GGCGTGATCT CACCGGAGCC GATCAAGTCC
GCCGGGCTGG GTGTCGGCGA GGTCGGTTAC CTCATCACCG GCGTGAAGGA CGTGCGGCAG
TCGAAGGTCG GTGACACGGT CACCGGCCAG CACCGTTCGG CCACCGAGGC CTTGGAGGGC
TACGCCGAGG CCAAACCGAT GGTCTACTCC GGACTGTATC CGATCGACGG TTCCGACTAC
CCGGACCTGC GCGAGGCGCT GGACAAGCTG AAGCTCAACG ACGCCGCGCT GGCCTACGAA
CCCGAGACGT CCGCGGCGCT GGGTTTCGGT TTCCGTTGCG GTTTCCTGGG TCTGCTGCAC
CTGGAGATCA TCCGCGAGCG GCTGGAGCGC GAGTTCGGGC TCGACCTGAT CTCCACGGCG
CCCAACGTCG TCTATCAGGT CGAAATGGAC GATGGCTCGG AATCCGAGGT CACCAACCCC
AGCGAGTTCC CGGACGGGAA GATCGCGGTC GTCCACGAAC CCATGGTCAA GGCGACGATC
CTGACGCCCA ACGACTACGT GGGCGCGGTC ATGGAGCTGT GCCAAAGCCG CCGGGGTGCC
ATGCAGGGCA TGGACTACCT GTCGCCGGAG CGGGTGGAGC TGCGCTACAC CCTGCCGTTG
GCCGAGATCA TCTTCGACTT CTTCGACCAG TTGAAGTCCA AGACCCGCGG GTACGCCTCG
CTGGACTACG AACCCACCGG CAGCCAGACC TCCGACCTGG TGAAGGTGGA CATCCTGTTG
CAGGGCGAGA AGGTCGACGC GTTCTCCGCG ATCGTCCACA AGGACGCCGC GTACTCCTAC
GGGGTCCGGT TGACCGAGAC GCTGCGCAAA CTGATTCCCC GGCAACAGTT CGAGGTGCCG
ATCCAGGCGG CCATCGGTTC GCGCATCATC GCGCGTGAGA ACATCCGCGC CATCCGCAAG
GACGTGCTCG CCAAGTGTTA CGGCGGTGAC ATCTCCCGTA AGCGGAAACT GCTGGAGAAG
CAGAAGGAGG GCAAGAAGCG GATGAAGACC ATCGGAAGGG TCGAGGTTCC GCAGGAGGCC
TTCATCGCGG CCCTGACCAC CGACGCGTCC GCTGTGGACA AAGCCGCGAA GAAATAA
 
Protein sequence
MNFAPGATDP QRIRNFCIIA HIDHGKSTLA DRMLQITGVV EQRKMRAQYL DRMDIERERG 
ITIKSQAVRM PWKARSGDST GDEFVLNMID TPGHVDFTYE VSRSLAACEG AILLVDAAQG
IEAQTLANLY LALDNDLTII PVLNKIDLPA AQPERYAEEL AHLIGCEPED CFKVSGKTGQ
GVEELLDAIV HQFTPPVGDA DAPARAMIFD SVYDTYRGVV TYVRVIDGSL SARERIKMMS
TGAVHELLEI GVISPEPIKS AGLGVGEVGY LITGVKDVRQ SKVGDTVTGQ HRSATEALEG
YAEAKPMVYS GLYPIDGSDY PDLREALDKL KLNDAALAYE PETSAALGFG FRCGFLGLLH
LEIIRERLER EFGLDLISTA PNVVYQVEMD DGSESEVTNP SEFPDGKIAV VHEPMVKATI
LTPNDYVGAV MELCQSRRGA MQGMDYLSPE RVELRYTLPL AEIIFDFFDQ LKSKTRGYAS
LDYEPTGSQT SDLVKVDILL QGEKVDAFSA IVHKDAAYSY GVRLTETLRK LIPRQQFEVP
IQAAIGSRII ARENIRAIRK DVLAKCYGGD ISRKRKLLEK QKEGKKRMKT IGRVEVPQEA
FIAALTTDAS AVDKAAKK