| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5463 |
|---|
| Symbol | |
|---|
| ID | 8886674 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 5794817 |
|---|
| End bp | 5795758 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | Helix-turn-helix type 11 domain-containing protein |
|---|
| Protein accession | YP_003514188 |
|---|
| Protein GI | 291302910 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.364956 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTCCCA CATCAGCGCG ACTGCTCAAA CTGCTGTCGC TACTACAGAC CCATCGCGAA
TGGTCCGGCA CCGACCTGGC CGAACGCCTC GAGATCGACG TGCGCACCGT CCGCCGCGAC
GTCAGCAAAC TGCGCACCCT CGGCTACCCC GTCAACGCCG CCCCCGGCGT GGCGGGCGGC
TACCAGCTGG GCGCGGGCGC CAAGATGCCG CCGCTGCTGC TCGACGACGA GGAGGCGGTG
GCCGTGGCCA TGGGGCTGCG CACCGCCGCC AGCGGCTCCA TCTCCGGCAT CGAGGAGAGC
TCGGTGCGGG CGTTGACCAA ACTGGAACAG GTGCTGCCGC CCCGGCTGCG CACCCGCGTC
AACGCCATGC AGACCGTCAC CGTCTCGACG GCGTCCAGCA ACGACCCCGT GGACGCCGAG
GCGCTGACGA TCATCGCCAC CGCCGCCCGC GACCGGGAAC GGATGCGCTT CGAATACCGC
ACCCACGACG GCTCGGAGTC CATCCGCAAC GTCGAGCCCC ACCGGCTGGT CCACACCGGA
CGACGCTGGT ATCTACAGGC CTTCGACATC GACCGCGAGG ACTGGCGCAG CTTCCGGGTC
GACCGGATGC GGCCACGCAC CCCCACCGGC CCGTCCTTCG AGGCCCGCGA GATACCCGAG
TTCGGTGTGG ACAGGTTCGC GATCTGGAAG GGCCAGCGCT ACCAGGCCCG CTACACCCTG
CACGCCCCCG TCGCCCAGAT GGCCGAACAG ATCCCGGAAC GCTACGGGAT GCTGGAGGCC
ATCGACGACG AGACCTGCAC CCTGTACACC GGCTCCAACT GGCTGGACGG GCTGGCGATG
TGGCTGGTGA ACCTCGGCGT CGACTTCGAG ATCCACGAAC CACCCGAGCT GGTGGAATAC
CTGCGGCAGA TGAACACCCG GCTGGCGCGG GCACTCGCCT GA
|
|---|
| Protein sequence | MLPTSARLLK LLSLLQTHRE WSGTDLAERL EIDVRTVRRD VSKLRTLGYP VNAAPGVAGG
YQLGAGAKMP PLLLDDEEAV AVAMGLRTAA SGSISGIEES SVRALTKLEQ VLPPRLRTRV
NAMQTVTVST ASSNDPVDAE ALTIIATAAR DRERMRFEYR THDGSESIRN VEPHRLVHTG
RRWYLQAFDI DREDWRSFRV DRMRPRTPTG PSFEAREIPE FGVDRFAIWK GQRYQARYTL
HAPVAQMAEQ IPERYGMLEA IDDETCTLYT GSNWLDGLAM WLVNLGVDFE IHEPPELVEY
LRQMNTRLAR ALA
|
|---|
| |