Gene Snas_5462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5462 
Symbol 
ID8886673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5793169 
End bp5794644 
Gene Length1476 bp 
Protein Length491 aa 
Translation table11 
GC content70% 
IMG OID 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003514187 
Protein GI291302909 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGTTA TCGAAGCCCC CGAGCGACCG CAGACCCTCA CCGAACCGGC GACCGCCGCC 
GAACCCGCCC CGTACCGGTG GCGCTGGGCG GCCCTGTCGG TGATCATGGC CGGAAGCGCC
ATGGAACTGC TCGACTCCAG CGTCACCTCG GTGGCCGGTC CGACCATGCA ACGGGACCTG
GGAGGCGGGG CCGGTCTGAT CCAGTGGCTG ACCGCCGCCT ACACGCTGGC CATGGTCGGC
GGCCTGCTGA TCGGCGCCCG GCTGGGCGAC ATCTTCGGAC GCCGCCGGAT GTTCCTGCTC
GGCGCGGTCG GATTCACGAT CACGTCGCTC GCGGTGGCCG TCAGCGTCTC GCCCGAGACC
GCGATCGCCG CGCGGGTCGC ACAGGGACTG TTCGGCGCCG CGATGGTGCC GCAGGTGTTC
GCGCTGATCA AGTCGATGTT CCCGGCCAGC GAATCGCAGA AGGCCTTCGG CATGGCCGGT
CCGATCATGG GCGCGGCCGT CATCGGCGGG CCCAGCCTGG CGGGCTGGCT CATCGGGCTG
GACCTGTTCG ACACCGGCTG GCGGATGGTC TTCGGGATCA ACCTGCCCAT CGGCATCGCG
ATCGTCGTAC TCGCCGCGAA ACTGCTGCCC AAGGACTCCG GCGACGCCAA GGCCAAACTC
GACATCATCG GTGCCGGACT GGCCTCGGCC GCCAGCGCGC TGCTGATCTA CCCGCTGGTG
CAGGGCCGCG AAGCCGGCTG GCCCGCGTGG TCGTTCGCGA TGATCGCCGT CTCGCTGATC
CTGTTCGGCG CCTTCGGCCT CTACCAGGTG CGGCGCGCCG CCAACGGCAA GGACGTCCTG
GTCATCCCGA GCCTGTTCCG CAAACGCGCC TTCAACGGCG GCCTGGTCCT GGGCGTGCTG
CTGATGGCCG CGATGGCCGG AGTCGGTCTG GTCATGGGCC TGCACCTCCA GCTGGGACTG
CACTTCTCGC CGCTGGCCGC GGCGGCCGCG ATGATCCCGT TCGCGGTGGC CATGGGCGGC
ACCATGGGCT TCGGCGACAA GCTGGCCCGG TTCGGACGCA AGACACTGCT GGCCGGAGCG
CTGCTGAAGG CCAGCGGCGT GACGATCCTG CTGGTCACCC TGGAGCAGGC GGGCGCCGAC
CTGGTCTGGT ACCAGCTGAT CCCCGGCCTG ATGCTGTCCG GTATCGGCGC GGCGATGTTC
ATGGGCCGCT ACTTCGACTC GGTGATGCAG GGCGTCGAAC CGCAGGAGAT CGGTTCGGCC
TCGGGCACCC TGACCTCGGT GCAGCAGCTG GGCGCGTCCT TCGGGGTGGC GGTGCTGGGA
ACCGCGTTCT TCGGCCGGTT CGCCGGAGAC CTGGAAAGCC TCATGGACGC TTCCCGGATC
GCGCTGGGCC TGACGGTCGT GGTGCTGGTG ATCGGCTTCG CCGTCGGCTT CACCCTGCCG
AAGCAGGCCG CGACCAACTC GCAGCCGACC ACGTAG
 
Protein sequence
MTVIEAPERP QTLTEPATAA EPAPYRWRWA ALSVIMAGSA MELLDSSVTS VAGPTMQRDL 
GGGAGLIQWL TAAYTLAMVG GLLIGARLGD IFGRRRMFLL GAVGFTITSL AVAVSVSPET
AIAARVAQGL FGAAMVPQVF ALIKSMFPAS ESQKAFGMAG PIMGAAVIGG PSLAGWLIGL
DLFDTGWRMV FGINLPIGIA IVVLAAKLLP KDSGDAKAKL DIIGAGLASA ASALLIYPLV
QGREAGWPAW SFAMIAVSLI LFGAFGLYQV RRAANGKDVL VIPSLFRKRA FNGGLVLGVL
LMAAMAGVGL VMGLHLQLGL HFSPLAAAAA MIPFAVAMGG TMGFGDKLAR FGRKTLLAGA
LLKASGVTIL LVTLEQAGAD LVWYQLIPGL MLSGIGAAMF MGRYFDSVMQ GVEPQEIGSA
SGTLTSVQQL GASFGVAVLG TAFFGRFAGD LESLMDASRI ALGLTVVVLV IGFAVGFTLP
KQAATNSQPT T