Gene Snas_5455 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5455 
Symbol 
ID8886666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5786608 
End bp5787777 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content70% 
IMG OID 
Productchaperone protein DnaJ 
Protein accessionYP_003514180 
Protein GI291302902 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCGA GAGCTTACGT GGCAAGGGAC TATTACGACA TCCTCGGCGT TTCACGCGAC 
GCCACTCCGG ACGACCTGAA GAAGGCGTAC CGCAAACTGG CCCGCGAGTT CCACCCGGAT
GTGAACTCGA GCCCGGAAGC GCAGGAGAAG TTCAAGGACA TCAACGCCGC CTTCGAGGTG
TTGTCGGATC CGCAGAAGCG CCAGATCGTC GACATGGGCG GCGATCCACT GGCACCGGGC
GGAGGCGGTG CCGGTCCGGG CGGGCCCGGT GGCGCCGGTC CGTTCATGGG CTTCCAGGAC
ATCATGGACG CGTTCTTCTC CGGTGGCGGC ATGGGCGGCG CCAGCCGTGG CCCGCGCCCC
CGGCGGCGTC CGGGTGCCGA CGCGCTGCTG CGACTCGACC TGGAGCTCAG CGAGGCCGCG
TTCGGCATGG AATCGCCGAT CACCGTCGAC ACCGCCGTGG TGTGCAGCGT GTGCGAGGGC
TCGGGAGCCG CCGACGACTC CCAACCCGAA ACCTGCGACA CCTGTAACGG CGCCGGTGAG
GTCCAAAGCG TCCAGCGCAC CATCCTGGGC CAGGTCGTCA CGGCCCGGCC CTGCCCCTCG
TGCAGCGGCT ACGGCACCGT CATCCCCAAG CCCTGCGGCA AGTGCGGCGG CGACGGCCGG
GTCCGCACCC GCCGCAAGCT GACCGTCAAG ATCCCCTCGG GCGTCGAGGA CGGCATGCGC
ATCCGGCTGG CGGGTCAGGG CGAGGTCGGC CCCGGCGGCG GTCCCGCCGG CGACCTGTAC
GTCGAGATCC ACGAGAAGCC CCACGACGTC TTCACCCGCG AGGGCGACGA CCTGCACTGC
AAGGTCAAAC TCCCGATGAC CGCCGCCGCT CTGGGCACCA GGCTGACCGT CGACACCCTG
GACGGACAGG AGTCGGTCGA CGTCCACGCG GGCACCCAAC CGGGCTCCAC GCTGCGCATC
CGGGGCGCGG GCGTCCCGCG CCTGCGCGGC GGCGACCAGC GCGGCGACCT GTACGTCCAC
CTCGACATCC GCACCCCGAC CAAGCTGGAC GCCGAGCAGG AACGCCTGCT GCACCAGCTG
GCCGAGCTGC GGGACGAGGA GATCGTGGAA CCGGCTCGCG GCAACGGCTT CTTCTCCCGG
ATGCGCGACG CCTTCAACGG TCACGCCTGA
 
Protein sequence
MTSRAYVARD YYDILGVSRD ATPDDLKKAY RKLAREFHPD VNSSPEAQEK FKDINAAFEV 
LSDPQKRQIV DMGGDPLAPG GGGAGPGGPG GAGPFMGFQD IMDAFFSGGG MGGASRGPRP
RRRPGADALL RLDLELSEAA FGMESPITVD TAVVCSVCEG SGAADDSQPE TCDTCNGAGE
VQSVQRTILG QVVTARPCPS CSGYGTVIPK PCGKCGGDGR VRTRRKLTVK IPSGVEDGMR
IRLAGQGEVG PGGGPAGDLY VEIHEKPHDV FTREGDDLHC KVKLPMTAAA LGTRLTVDTL
DGQESVDVHA GTQPGSTLRI RGAGVPRLRG GDQRGDLYVH LDIRTPTKLD AEQERLLHQL
AELRDEEIVE PARGNGFFSR MRDAFNGHA