Gene Snas_5444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5444 
Symbol 
ID8886655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5776977 
End bp5778164 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content70% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514169 
Protein GI291302891 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCAG CGCATCCAAT AGAAAACGCC TGGCTGTCGA CGGGTGGCAC CGGCGCCCAA 
AACTACGACG AATACGCCGA CGAATCCAGG ATCACTGAAA TAGTCGCGGC GAAGCCGACA
TCGATGCTGG CAGTGGAGAT GCCCGACCGC ACTCCCGAGG CGGTGGCGGC GGGGATGAGC
TTCACCGACT GCCTGCCCGC GGCCGCCGAA CGGCTGGAGG CCCTGCAGCA GACGGGCCGG
TTCGCGCGCG CCGGGCAGGT CGTGGTGGCC TACCGCATCA GCGGCGAGGA CCGATGCGCC
TACGGCCTGT TTTGCATGGT CGACACCGAC GAGATCTCCA CCTCGGCCGA GGAACCCGGC
CGGGTGATCC GCAACGAGGA CGTCTTCATC GAGAAGGTCC GGCAGCGCGC GGCGCTCAAC
GCCCAGCTGC GGCACCTGCT GTCGCCGGTG CTGCTGGTGC AGCACGGCAA GTCCGAGGAA
CTCCAGGCCG CGCTGGCCGA CGCCTGCGTC GGCGAACCCG CCGTGACCGA TGTGGACGAG
GCCGGGCGGC GGCACGAGAT CTGGCCGGTG GCCCCGGGTC CGAAACAGGA CCTGCTGTGC
GAGCTGGCCG GGGGAGGCGA CCTCATCGTC GCCGACGGCA ACCACCGCTC GCTGGCCGCG
CAGGTCGGCG AACTGCCGCG CTTCCTCGCC GTGGTGACCA CCCCGGAGTC GGTCACGATC
CAGCCGTACC ACCGGCTGCT GGTGTCGGCC CCGCTGACCG GCGAGGCGCT GCTGGACGCG
CTGCGCGAGC GCGGCGCCGA GGTCACCGCC GTGCCGGGCC CGCTGTCGAC CCCCGACGGG
GTCGTGCACC TGTACCTGAA CGAAACGGTC TACGCCGTCC GGCTGCCCGC CGTCGAAGGC
TCCATTGTCG AGCGACTCGA CCACGCGCGG GTGGAGTCGG TGCTGTTCAA CGACATCCTC
GGCATGGACG CGGGCGACAA GCGAATCACC TATGTGGGCG GTGACTACCC GCCGTCGTGG
CTGGCCGAGC AGGTCGACTC CGGCTCGGCG GTCGCCGCGA TCCTGATCGC CGCGGTCACC
GTCGAGGACT TCATCTCGGT GAACCTGGCC CGGCTGAAAC TGCCCCGCAA GTCGACCTGG
TTCACGCCCA AGGCCCGAGC CGGGCTGGTG CTGGCCGACC TGCGATGA
 
Protein sequence
MTAAHPIENA WLSTGGTGAQ NYDEYADESR ITEIVAAKPT SMLAVEMPDR TPEAVAAGMS 
FTDCLPAAAE RLEALQQTGR FARAGQVVVA YRISGEDRCA YGLFCMVDTD EISTSAEEPG
RVIRNEDVFI EKVRQRAALN AQLRHLLSPV LLVQHGKSEE LQAALADACV GEPAVTDVDE
AGRRHEIWPV APGPKQDLLC ELAGGGDLIV ADGNHRSLAA QVGELPRFLA VVTTPESVTI
QPYHRLLVSA PLTGEALLDA LRERGAEVTA VPGPLSTPDG VVHLYLNETV YAVRLPAVEG
SIVERLDHAR VESVLFNDIL GMDAGDKRIT YVGGDYPPSW LAEQVDSGSA VAAILIAAVT
VEDFISVNLA RLKLPRKSTW FTPKARAGLV LADLR