Gene Snas_5443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5443 
Symbol 
ID8886654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5776501 
End bp5776980 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content68% 
IMG OID 
Productribose 5-phosphate isomerase 
Protein accessionYP_003514168 
Protein GI291302890 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGTCGC CCATGCGGGT ATACATCGGC AGCGACCACG CCGGATTCGA GCTCAAAACC 
GCCCTGGTGA AGCACCTGAC CGGTGTCGGG CACGAGGTCG TCGACGTCGG CCCCCACGCC
TTCGACGCCG AGGACGACTA TCCGCCGTTC TGCCTGAACA CCGCGGCGCG CGTCGTCGCC
GACCCGGGCA GCCTCGGCAT CGTCCTTGGC GGTTCGGGCA ACGGCGAACA GATCGCCGCC
AACAAGGTCG CCGGTGCCCG CGCCGCGCTG GCCTGGAAAC CGGAGATCGC GAAGCTGGCG
CGCGAACACA ACGACGCCAA CCTCGTGTCC ATCGGGGCCC GGATGCACTC CACCGACGAA
GCGATCGCCA TTGTGGACGA GTTCCTGTCG GTGCGGTTCT CGGGCGCCGA GCGCCACGCG
CGCCGCATCT CACAGCTGGA CGACTACGAG CGGACCCGCC AACTGCCGCC ACTGGTGTGA
 
Protein sequence
MMSPMRVYIG SDHAGFELKT ALVKHLTGVG HEVVDVGPHA FDAEDDYPPF CLNTAARVVA 
DPGSLGIVLG GSGNGEQIAA NKVAGARAAL AWKPEIAKLA REHNDANLVS IGARMHSTDE
AIAIVDEFLS VRFSGAERHA RRISQLDDYE RTRQLPPLV