Gene Snas_5437 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5437 
Symbol 
ID8886646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5768820 
End bp5769635 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content66% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514162 
Protein GI291302884 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.453469 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAATGC CCGCGCTGAC TCCGACCGCA AGACTGAAAC CGGCCCGCGC CGTGACCCGG 
GTGATTCCCC GACGACTGCG TCACCGCGGA ACGAACACGC ATCCAGAAGC CGAGCATGCG
TTGCCCCAGC GCCTCACCGA GTGGCATGCC ATGGCTCCTT TGCAGCGAGC CCAAGCCTGG
AGCGAACTGG TGGATTGGGT CGCCTGGCTA CACGACCGCT ACGAACTGTC GGTCGCCAAC
CGGCTCCCGG CCTGCTGGCC CGGCCACCCC GGCCTGATCG AAGAACTGTG GGCCCTGCGG
CTATGGCGAC GCGATATCTA CTCCACCCAG GACACTGATT CGGGCAGTGC CCCGAATGGG
CTCGGTCAAC CGGCCCGGTA TTGGCACACC GAGCTTCACA ACGTGATCAC CCGCGCCGAA
CAGTTCTACG CCAGCAAATG CCGCTCCGGG CACAAGCCGG CCGCAACTCT GACCGACCAC
CCCGAGACCG TCCGCGAATG GCATGCCGCC GATCCCCTCA TCGGCGTCGC CACCATGCCA
GCCGGAGCCG ACCCGGCCAA CGACATCGAC GGGGGTGCGA CCGTGGCCGA AACCATCATG
ACCGCAGCGT TCCTGCGCGG CACCGCCAAA CCGGTCAACA ACACCGCCGG GCAGTTCGCC
TGGTACCGCG GATCCTGGTG GGCACCCGAC GGCCCTAACT GGGTCTCCGT TCCCGACTCG
ACGATGACCG CCTGGCTCGA TAATCACGCC GCGCACGTTC GCACCACCGA GGCGGCAGTA
GTCGGCACAC CCACCAAATC GACTCGAACA CCGTAA
 
Protein sequence
MTMPALTPTA RLKPARAVTR VIPRRLRHRG TNTHPEAEHA LPQRLTEWHA MAPLQRAQAW 
SELVDWVAWL HDRYELSVAN RLPACWPGHP GLIEELWALR LWRRDIYSTQ DTDSGSAPNG
LGQPARYWHT ELHNVITRAE QFYASKCRSG HKPAATLTDH PETVREWHAA DPLIGVATMP
AGADPANDID GGATVAETIM TAAFLRGTAK PVNNTAGQFA WYRGSWWAPD GPNWVSVPDS
TMTAWLDNHA AHVRTTEAAV VGTPTKSTRT P