Gene Snas_5425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5425 
Symbol 
ID8886634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5755998 
End bp5757353 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content58% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514150 
Protein GI291302872 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACTTCG GAACGACGGA CGGATCCAAC ACTTCGCCGA ACGTGCGCGT GGGCAACCGG 
TCGATGAGTC TGGACGACTT GTACCGCGAC CGCGCACGAT GCGCGCGCAT CCTGGCGAGC
GCAAGAGCCG AAGACGGGCA CGCCTGGTGC GAATGCAACT GCCCACAATC GAAACTGGTC
ATCCGATGCC GCCAAGGCGT CTGGCACCTG GCTCGGTGGC CCGGCGACCG AATCGGCCAT
GCGGCAAATT GTCCCTTCCG AGGCATAGAC CCCGGGTTGA CCGGCCGCGC TGCCTTCAGC
GAATCCGCGA TCCAGGAATC ACGCGATGGG GTCCATCTCA GGATCGCCAC CAGCTTGACG
ACGGATCTTG GTACCCGAAG TAAGCCGGGG CTCGGTGACC ATCACCGTGG TGGTGGTTCG
AATCGACACC GTCTGACGCT GCTGGGACTA CTGGAATATC TCTGGGAGGA AAGCCGCCTC
AACGAATACC GGAGTGGGTC ACGGCTATGG TGGGGAAGGT GCCACCACGC GCTCGTAAGC
CAAGTGGAAA ACAGCTTCCT CGGCGACCAG CCTTTGAGCG AAGTGATGTA TGTGGTTCCG
CCGTTTCGGA AAGAAAGCGC GGCCAATAAC GAAGCCACAT GGAACGCATT TGCGGCGGGA
CTTGGTTCAA AGAATCGTCG CTCGCGCCTG GGGATCGTCC TAGGTGAATT CAAGGACGCG
GCGGCGACTT CACGCGGGTA CCGGATTCGA CTGCGCAACT TCCGAAAGCC CATATTCGTG
ACGCGAAAAC TGTGGGACAC ACTCACCATG AGGTTTCAAT CTGCGTTCAC CTCTCAGATG
ACTGCACAGG GCAGGCAAGT TGGCTTGTGG GTTGTCGACA AGGCGACGCG AGGGTATCTG
CGATTGTCAA CAGCTGGCAT CATGGCGACG ACACAGTCAT GGATCCCTGT AGATTCGGGA
TACGAATTGA CGATGGCCAA TGCACTTGCC GATGCCAACC GGAGCTTCCT GAAACCATTG
CGATATCAGC ATTGTGACGT GGTACTGCCA GACTTCGTTA TTACCGACAC CAACCCAAGA
ACATATATTG AAGTTTGGGG AATCGTCGGT CGAGAGTCTT ACGAACGACG TAAACAGGAG
AAGCAGGACT ACTACAAACA GCGCGGACTC CAGCTCATCG AGTGGAACGT TTCTGAATCG
ATCCCAGAAG TACCGCGACT GTTATCGTGT AGGGTCTCAT CGAGGTTGAG CACCGAGGAC
GCCGTGACCA GTAGCTCGGG TCAATTTGTC GCCGGTTTGA GCAGCTCGGA TTCTCACGGG
AATGAGCAAT TCCCTCAGGC CACCCCAGCG TTGTGA
 
Protein sequence
MHFGTTDGSN TSPNVRVGNR SMSLDDLYRD RARCARILAS ARAEDGHAWC ECNCPQSKLV 
IRCRQGVWHL ARWPGDRIGH AANCPFRGID PGLTGRAAFS ESAIQESRDG VHLRIATSLT
TDLGTRSKPG LGDHHRGGGS NRHRLTLLGL LEYLWEESRL NEYRSGSRLW WGRCHHALVS
QVENSFLGDQ PLSEVMYVVP PFRKESAANN EATWNAFAAG LGSKNRRSRL GIVLGEFKDA
AATSRGYRIR LRNFRKPIFV TRKLWDTLTM RFQSAFTSQM TAQGRQVGLW VVDKATRGYL
RLSTAGIMAT TQSWIPVDSG YELTMANALA DANRSFLKPL RYQHCDVVLP DFVITDTNPR
TYIEVWGIVG RESYERRKQE KQDYYKQRGL QLIEWNVSES IPEVPRLLSC RVSSRLSTED
AVTSSSGQFV AGLSSSDSHG NEQFPQATPA L