Gene Snas_5407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5407 
Symbol 
ID8886616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5742748 
End bp5743566 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content57% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514132 
Protein GI291302854 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.186042 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAGCA ACCTGAACCC AAATCTCGCG AAGATTCAAC TTGGTCGGTT CCTCAAGGAG 
TACCGGCTCC GTGCCGGGCT CAAACCAGGA GACGCTGAGG TCGTCAAGAT CGCCAAAGCC
AGCAAGCTCA AAGCGATCGA GGCCGGACGC GTTCAGTCGT TCAGGTATGC CGACATTCTC
GCTTTCGGGT CCATCTATGA CGTCACCCGC GATGAACTGG ACAACCTCAC CGAGCTTCAA
GAAGCCAGCG AGAAACCTGG GTGGTACCAC CAATTTGACG TCTTGGAGGC ATTCACGACG
TTCCTGACGA TGGAGAGCGT GGCGTCGAAG TTGCTCATCG TCGAGATCGA GTTCATCACC
GGCCTGTTCC AGATCCCTGA GTACACAAAT GCGTTGCGCG AGTTCAACTT GGAGAACAAG
GGTGGCGCCG ACAAAGGTGT CAAATCCGAA CGTCAGGAAC TGGTCCTGGA CGGGGAGCAG
CCACCTGAGA TCGTCTACAT CACCAGCGAG GCGGCCCTGA AGCGTCAAGT TGGCGGACGG
AAAGTGATGA AAGCGCAGCT TGAGCACCTA GTGACGATGT CCGAACGGCC GGGCATCGAC
ATCCTCGTGC TCCCGTTCAG CCTGGGACCG CACCACGCCA TGTTTGGACC GTTCACCATC
ATGTACTTCG ACGGCGGGGA GTTCCCCACC ACGGTGTATC TAGAATCCAT CGATGGAAGC
CGCTACGAGG AGGGCGAGAG GTTCATCAAG CTCTACGAAA GCGTCTCCGA CAAGACCCGC
AAGCAAGCGA TACCGATTAA GGATTACGCA CATGGTTGA
 
Protein sequence
MSSNLNPNLA KIQLGRFLKE YRLRAGLKPG DAEVVKIAKA SKLKAIEAGR VQSFRYADIL 
AFGSIYDVTR DELDNLTELQ EASEKPGWYH QFDVLEAFTT FLTMESVASK LLIVEIEFIT
GLFQIPEYTN ALREFNLENK GGADKGVKSE RQELVLDGEQ PPEIVYITSE AALKRQVGGR
KVMKAQLEHL VTMSERPGID ILVLPFSLGP HHAMFGPFTI MYFDGGEFPT TVYLESIDGS
RYEEGERFIK LYESVSDKTR KQAIPIKDYA HG