Gene Snas_5399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5399 
Symbol 
ID8886608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5733823 
End bp5734809 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content65% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514124 
Protein GI291302846 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.278266 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCA CTTCCTCCGC CGACATCACG TTGTCCTCAC CTGCCGACTT GGTCGCAGCC 
ATCCCACACC TCGTGGGCTA CCGGCCCACC GATTCCGCCG TCCTCGTGGG ACTCGACGAA
GGCCATATTA AGGTGACGCT GCGCGCCGAT CTTCCATTGG CCAGCGGCTG CTTCGATGTC
TTCGCCGATG TCATCACAAC CATGCGCCGC AACGACGCCA CCGCAGTGGT CCTAGTCGGT
TTCGGTGAAG CCGCTCGCGT CACTCCCGTC GTCGACCACC TGCTGCCACG ACTCCACGGC
GCGGATATCG AGGTGCTTGA CGCCATCCGC GTCACCGGAG GCACATTCTG GTCCTACGTG
TGCCCGGAGC CCACGTGTTG CCCACCGGAG GGCAAGCCCG TCCCGCGTGA CTCGCGGATC
GAAGCCGCGT TCGTCGGCGA GGGCATGGTG GCCGCGCCCG ACCGCAATGC GGTCGCCGCG
CAGATCGATC CCGTCGACTT TGAAACCAGG AACCACGTCG CACTCCACCT GTGCGACTTC
AAACGCACAG CGCGTCTGGA TCGGCTGGTG AATGCCAAGC GCGACCGCGC AGCAGAAAAT
ACCGCCAAAC TCGCTGGCGC GGCGAAGGGC GTTGAAGCCG GAACGATGCC CGGCTTGGCA
TTGACCGCGA AACTGGGCTG GGCCATTGCA GAAACCAGCA CCGGGTACAA AACCGCCCTA
GCGATCGTCG ATGCTGGCGA CCACGCCCAT GGTTTGGCGT TGTGGATCTG GCTGGCCCGC
CACCACACCG GGATCTACCG TTCCCGGGCC GCCGCGATGA CGGCCTACGC GGCTTGGCGC
CGCGGCAACG GGGTCTTGGC CGGTGAAGCC GTGGGGGTGG CGCTTCGCCT CCAGCCCACG
TGCCGACTCG CCCAAGCCGT GGGACTCGCG TTGTCCAACG GGTTTCCACC AGCGAAGGTT
CCACCCTTCT CTGAAGTGAT CCCGTGA
 
Protein sequence
MNTTSSADIT LSSPADLVAA IPHLVGYRPT DSAVLVGLDE GHIKVTLRAD LPLASGCFDV 
FADVITTMRR NDATAVVLVG FGEAARVTPV VDHLLPRLHG ADIEVLDAIR VTGGTFWSYV
CPEPTCCPPE GKPVPRDSRI EAAFVGEGMV AAPDRNAVAA QIDPVDFETR NHVALHLCDF
KRTARLDRLV NAKRDRAAEN TAKLAGAAKG VEAGTMPGLA LTAKLGWAIA ETSTGYKTAL
AIVDAGDHAH GLALWIWLAR HHTGIYRSRA AAMTAYAAWR RGNGVLAGEA VGVALRLQPT
CRLAQAVGLA LSNGFPPAKV PPFSEVIP