| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5396 |
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| Symbol | |
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| ID | 8886605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 5727436 |
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| End bp | 5732307 |
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| Gene Length | 4872 bp |
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| Protein Length | 1623 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | TrwC relaxase |
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| Protein accession | YP_003514121 |
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| Protein GI | 291302843 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.348117 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATTC ACAAACTGTC GGTCGGCGAC GGCTACACCT ACCTCACCCG ACAGGTTGCA
GGCGGCGATG TCCAGCGCGC CCGCGGCCAA GACGCCAGCG ACTACTACAC CCAGGAGGGC
AACCCGCCCG GGCGATGGAT CGGCCGCGGC GCCCATTTGC TCGGGCTCGA CGGGCAGACC
GTCACCGAAG ACCAGATGAA GAACCTCTTC GGACACGGCG CTCACCCCAA CGCCGAAGCG
ATCATCGACA AGTACATCGC CGACCACACC CGACCTGGCA TGACCGACGC CCAGATCCGC
TTTCTCACCG CGGCGGCGGA GAAACACGCT CAGCTGGGCC GCCGTTTCGG TGCTTACCGC
CGTCTCGAAC CCTTCGACCA GCGCGTTGCC GACCGGCTTG ACGCCATTGC CGAGCGCACC
GGCCGTGCCG CCACACCCGC CGAAATCAAG CAGGCCAAAC AGCAAGAGGC CGCCAAGCAA
CGATGCGGGG TCGCTGGCTT TGACCTCGTA TTCGCCCCAG TGAAATCCGC CGCGCTGGTA
TGGGCGTTGC ACCCTGACGT GCGCGTCCGG CAGCAAGTCA AAGCTGCCCA TGACGCCGCC
GTGGATTCCG TTATGGAGCT GTTGGAGGAG CACGCCGCGC ACACCCGTGC CGGAACCGGG
GGAGTAGCCC AACTCGACAC CAAGGGCCTG ATCGCCGCGC GATTCGACCA CTTCGACTCC
CGTGCCGGCG ACCCCAACCT CCACACTCAC ATCCCGGTCG CGAACAAGGT CTTGGGCCGT
GACGGCAAGT GGCGCTCCTT GGACGCTCGC GGCATCTACG CCATGACGGT GGCAGCCTCC
GAGCACTACA ACACCCGCTT CGAAACCGAG ATGGTCCACC GGCTCGGCGT CACCTTCACC
GACCGCGAAG CAGCCGGATC CAAGCGCCCC GTTCGCGAAA TCGACGGCAT ACCCGCCGCG
ATGATCAAGC ATTTCTCGCG CCGTCGTCTC GACCTGGAAG CCCGGTACAA GCAGCTGATC
GCCGCCTACC GTGCCGACCA CGGCACCGAC CCGCCTGCTG CCATATGCCA CAAGCTCGCC
CGTCAAGCCA CCCTCGACAC ACGCCCCGAC AAGCCCACCC TCCGGTCCCT GAAGCAGATG
CGCCAAGAGT GGGAAGCCGA CCTCATCCAT ACGTTCGGTG GGAAAGCGCT GCGGCACATC
ACCTCGGCCG TTCCCACCCG ATCTGCCGTC GCCGAAGCCG TGTCGTTGTC GACCGACGAG
GCCGAGACCA TCGCCGCCTC AGTGGTCCGC ACGGTCGCGA GTCAGCACTC CACCTGGACC
CGGTGGAACC TGCATGCCGA AGCCGAACGG ACCCTGCGGG CAGCATTCCG GTTCCCCACG
CGCGAAGCCC ACGACCATGC CGTGGAAGTT GTCATGGCAT TGGCGACCTC GCCCGCCCAC
TCCATCCGCA TCGACGCGCC TTCCCTCGTT GATGAGCCTG ATGTCTTGCG CCGAGCCGAC
GGCGAATCCG TGTTCCACCA ACACGGATCC ACTCGGTACA CCTCCCAAGC CGTTCTCGAC
GCCGAGCAGC GGCTCCTCGG CGCCGCCAAG ACACCCACCG ACAAGGGATT GTCGGCTGGT
TTCGTGACCG GAGTCCTCGA CGGATTCGAC ACCACGAGCC ACCAACTCGA TCCAGGGCAA
CGCCACCTCG CCGCCGGATT CGCCACCACC GATCGGCTGC TGGCCGTGGG CATCGGCCCC
GGCGGAGCAG GCAAGACCAC CGCCATGAAG GCATACGCGC ACACCCTCAC CACCGCCGGG
CACCGCCTGA TTCCGTTGGC GACCTCGGCC AACTCCGCTG CCGTGCTGGC CGCCGACCTC
GACACACCCG CCGACAACCT CCACAAGTTC CTGTGGGAAC ACAGTCGCGG CCACCACGCC
AATGCCCTCA AACACGGTGA TCCAGTGCCG GAATCGGCAC AGTTCTTCGC CCTCAAACCT
GGAGATGTCG TTCTCGTCGA CGAAGCCGGT CAAGCCGGAA CCTTCGCCCT CGACCAACTC
ATCACGATCG CGAAGCGCCA CGGCGCGCAA GTCCGCCTCC TGGGCGACCA TCGGCAACTG
TCCGCCGTCG AATCCGGTGG CGCGCTGCGG CTCATTGCCG CCGAAGCCGG AGCCTTCGAA
CTCGACACCC TCCACCGTTT CAGCGACCCG GCTGAGGCCC GTGCCACCCT GAAACTCCGT
GAGGGCGACG CCAGCGGACT CGATCATTAC GAGATCGCGG GCCGCATCTT CGGCGGGTCC
AAAGACGCCA TGATCGAGAA GGCGTACACC GCCTGGCACC GCGACCTGAG CACCGGCCGC
ACCAGCGTCA TGATCGCCGC CACCAACGCC GACGTCACCG CGCTGGCCGC CCGCGCCCGT
ACCGACCGCA TCAGAGCCGG GCACGTCAAA ACCACGGGCG TCGACCTCCA CGACGGCAAC
ACCGCCGGGG TCGGCGACTG GGTCATCACC CGCCACAACC ACCGTGGCCT GCGACTCAAC
CGCGGTAAAG ACTTTGTGCG CAACGGCGAC ATCTGGACCG TCATCCGACA CCACCGCGAC
GGGTCGCTAT CCCTTCGCCA CCACGACCAT CGCGGCACCG TCCGCATCCC CGCCGACTAC
GTCGCCGAAT ACGTTGAATT GGCATATGCC ACCACCGCCA CTCGCATCCA GGGCGCCACC
GTGGACACCG CTCACGCCCT GGTCACCGAC GACATGGCCC GTGAACACCT CTACGTCGCC
GCCTCCCGCG CCCGCCACAA CACCAGCCTG TATGCCGTCA CCCACGTCAA CCTCCCCGTC
GACGAAGACG ACCGCCTGTT CCGCCCCGAC TTCGACCCCG ACGCCACCGC CGCCCGCGAG
ATCCTCGAAA CCGTTGTTGC CCGTGAAAGC GCCGAGCGAT CGGCCACCGA AACGATCCGC
GACGCCCAAA ACGACGCCGA ATCCCTGGCC ACCCTCGTGC CCCAGTACGG GTACGCGCTG
GAACAGGCCA CCCGCGAGCA CTACACCGGC CAGTTGACCA CCGCCCTTGG GCCGGACGGC
GCTGCGATGA TCACCAACGA CGGTCTATCC CCGTTGATCG CCGCGCTGCT GGCCGCCGAA
ACAGCTGGCT GGAAACCCCA TGACATCATC GCCCTAGCCG CCGACGACGG CCCCTTGGAA
CTCGCCGACT CTCCGGCAGC GCTGCTGGCC TGGCGCATCC GCTACATCAC CGACCACCAC
CCGGCTCCGC CCCCAATCGC TCAACCCACC GCCGCCGACG CCCGCCGATA CGCCCGCGCC
CTGGCGCGCA TCTACCCCCG CCTTAAACCC GACCCCGACA CCGCGTTGAC CCCGCCACCA
CCGCGGACCC CCAGCGACCA ACAACCCGGA CCCACCATTT CGGCCAGCCA AGTTCACGCC
TGGGCCAACG CCATCGCCGA ACACCTCGGC GTCGATTCAG CCGAGATCGA AACCCACCGA
GCCTGGCCCC AACTGGCCAC CACTCTCGCC GGCCACCACG CCGCCGGGAA CGATGTCCAC
CAACTCATCA CCACTGCCAC CCGAACCCCC AGCACCGACC TGACGACGGT CGTTCGCACT
GCCCGTCGAC TCGCGACACC CGCGACCGTG CGGATGCCCG CCGCGATCCG GCATCACCAA
GCCGCCATCA CCACGATGGG CCCTGACCTG GCTCACCGTG CCCGAATCTC TGCCGCCTGG
CCTGCCGTCA TCACCGCCCT GACTCGTGCC GAACAGCTCG GCCGCGGACC CGAAACCGCA
CTGCGCTGCG CCATCAGCCA ACGCGAATTC CGAGGCGCCC GCGACATCTC CCAACTCTTG
GCCTGGCGCA TAGGCCGCCA AAACCGCATC GCCCACACCG ACCCCAGCCT CACCCCCGCA
AGCCTGTGGC GATCCCTAGC CTGGAGCCTC AAAGCCGCCG AAACCACCGG CACCAACCCC
ACTCGGCTAC TACGGGCCGC CGCCTTGGAC TCCACCAACC TCACCGACTT CGTCGCCCAC
GTCCACGACA ACACCCGCCG CCTCCACCAC ACCCACCAGC CACCCTCCCC AATTAACCTG
CCCTGGTTGC ACACCCCCAC CGGCCTACTC GACAGCCCCA CCATCGACGA CCAATGGCGC
ACCTACCTCC ACGACCTCGG CACCCAAATC AACCACCGCG TCACCGAACT GACCGCCCAA
GTTCACAGTG AGAACCCCGA GTGGCTGTCC GCTGCCGGAC CACAACCCCG CCAACCGCGC
CAAAGCCATG CCTGGAACGA AGCCGTTGCA GTCATGGCCG CATACCGCGA CCAACACCGC
ATCACCACCG ACGACCCCCA CCACCCTCTC GGTCCCTACC CAACATCTGG CCACGCGGGA
CACCACCCCT ACTGGCACGC CGCTACCGCG CTGCTCGCCG CCACCCAAAC CACCAGCCCC
ACGCCACCGT CCCGTCAATC AACCGCGACC GGCCTATCTC ACGACGTCGA GGACCAACTG
CTCGCAGACA TCACCACCGC CGTCTACACC CACCTACCCA CCGACGAACA ACACGCCATC
AACCGCCAGC TCGCTAAGCA CCTTCACCCC ACGGTCGGCG AAATCGCCAT CCCCGACCAC
GCCACCCACC CCTCCAACAC CCACCAGCTC GCCGCCGTCC TTTCCCAACG GGGGCACCTC
CCCAACTCCA CGCAACTGCC CAGCAAGGCA GCTACCGCCC CCAACCCGCA CACCACATCG
CCCCGCAACA CCACTTCTCC GGTCGTGAGC ACCAAACCCT CTTCGTCTGG TCCCGGGCCG
CAGCCGCACG CCGTGCCTGC GCCCCAAGCA CACCCTCAGA TCGAGAACTC TCAACCGCGT
CCTCGTCTTT GA
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| Protein sequence | MTIHKLSVGD GYTYLTRQVA GGDVQRARGQ DASDYYTQEG NPPGRWIGRG AHLLGLDGQT
VTEDQMKNLF GHGAHPNAEA IIDKYIADHT RPGMTDAQIR FLTAAAEKHA QLGRRFGAYR
RLEPFDQRVA DRLDAIAERT GRAATPAEIK QAKQQEAAKQ RCGVAGFDLV FAPVKSAALV
WALHPDVRVR QQVKAAHDAA VDSVMELLEE HAAHTRAGTG GVAQLDTKGL IAARFDHFDS
RAGDPNLHTH IPVANKVLGR DGKWRSLDAR GIYAMTVAAS EHYNTRFETE MVHRLGVTFT
DREAAGSKRP VREIDGIPAA MIKHFSRRRL DLEARYKQLI AAYRADHGTD PPAAICHKLA
RQATLDTRPD KPTLRSLKQM RQEWEADLIH TFGGKALRHI TSAVPTRSAV AEAVSLSTDE
AETIAASVVR TVASQHSTWT RWNLHAEAER TLRAAFRFPT REAHDHAVEV VMALATSPAH
SIRIDAPSLV DEPDVLRRAD GESVFHQHGS TRYTSQAVLD AEQRLLGAAK TPTDKGLSAG
FVTGVLDGFD TTSHQLDPGQ RHLAAGFATT DRLLAVGIGP GGAGKTTAMK AYAHTLTTAG
HRLIPLATSA NSAAVLAADL DTPADNLHKF LWEHSRGHHA NALKHGDPVP ESAQFFALKP
GDVVLVDEAG QAGTFALDQL ITIAKRHGAQ VRLLGDHRQL SAVESGGALR LIAAEAGAFE
LDTLHRFSDP AEARATLKLR EGDASGLDHY EIAGRIFGGS KDAMIEKAYT AWHRDLSTGR
TSVMIAATNA DVTALAARAR TDRIRAGHVK TTGVDLHDGN TAGVGDWVIT RHNHRGLRLN
RGKDFVRNGD IWTVIRHHRD GSLSLRHHDH RGTVRIPADY VAEYVELAYA TTATRIQGAT
VDTAHALVTD DMAREHLYVA ASRARHNTSL YAVTHVNLPV DEDDRLFRPD FDPDATAARE
ILETVVARES AERSATETIR DAQNDAESLA TLVPQYGYAL EQATREHYTG QLTTALGPDG
AAMITNDGLS PLIAALLAAE TAGWKPHDII ALAADDGPLE LADSPAALLA WRIRYITDHH
PAPPPIAQPT AADARRYARA LARIYPRLKP DPDTALTPPP PRTPSDQQPG PTISASQVHA
WANAIAEHLG VDSAEIETHR AWPQLATTLA GHHAAGNDVH QLITTATRTP STDLTTVVRT
ARRLATPATV RMPAAIRHHQ AAITTMGPDL AHRARISAAW PAVITALTRA EQLGRGPETA
LRCAISQREF RGARDISQLL AWRIGRQNRI AHTDPSLTPA SLWRSLAWSL KAAETTGTNP
TRLLRAAALD STNLTDFVAH VHDNTRRLHH THQPPSPINL PWLHTPTGLL DSPTIDDQWR
TYLHDLGTQI NHRVTELTAQ VHSENPEWLS AAGPQPRQPR QSHAWNEAVA VMAAYRDQHR
ITTDDPHHPL GPYPTSGHAG HHPYWHAATA LLAATQTTSP TPPSRQSTAT GLSHDVEDQL
LADITTAVYT HLPTDEQHAI NRQLAKHLHP TVGEIAIPDH ATHPSNTHQL AAVLSQRGHL
PNSTQLPSKA ATAPNPHTTS PRNTTSPVVS TKPSSSGPGP QPHAVPAPQA HPQIENSQPR
PRL
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