| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5354 |
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| Symbol | |
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| ID | 8886563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 5690250 |
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| End bp | 5691602 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diamin opimelate/D-alanyl-D-alanyl ligase |
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| Protein accession | YP_003514080 |
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| Protein GI | 291302802 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000188354 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0484723 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGGGCA TGATCCCACT CAGTCTCGGC GAGATCGCCG TGGTCGTTGA CGGGACGGTC
GAGGGTGACG GCGCCGTGAT GGTGACCGCT CCGGCCGTGC TCGATGGTCG GCAGGCGGAG
CCGGGCGGCT TGTTCGTCGC GTTCGCTGGG GATCGCGTGG ACGGCCATGA TTTCGCCGAG
CAGGCGGGCG AAGCCGGTGC GGTGGCGGTG CTTGGTTCCC GGCCCACGTC GCTGTCTACT
GTGGTTGTCA AGGACGTGCA GGCCGCGGTG CAGGCGCTCG CCGCTTATGT TGTGGGGCGG
TTGCGGGATG GGTTGACCGT TGCCGGATTG ACGGGGTCGC AGGGGAAGAC CAGTACCAAG
GATCTGTTGG CGACTGTGGT GTCGAGTACC GCACCGACGA TCGCCGCGGT CGACTCGTTC
AACAACGAGA TCGGGGTGCC GGTCACCATG CTGCGCGCTG ACGCGGCGTC TCGGTTCCTG
GTGCTCGAAA TGGGTGCCCG TCGTGTCGGT GACATCGCGG ATCTCACCGG TTTGGTCGCG
CCGGACGTCG CGGTCGTCCT CAACGTGGGT CAGTCGCATC TGAGTTATTT CGGGTCGCGG
CAGGCCATCG CCAAGGCCAA AGGTGAGCTG GTGCGAGGGC TGGCGCCCGG GGGCACCGCC
GTTCTCAACG CCGACGATCC CGTGGTGGTC GCGATGCGTT CGCTGACCAA TGGGCCGGTG
CTGACCTTCG GGTACGCGGA GCATGCCGAC GTGCGGGTAG TCGACCTGAC GCTGGATCGG
CTGAGCCGAC CGTCGTTCAC GTTGCGAACC GCGGACGGCT CGGCTTTCGT CGAGCTGCCG
CTCGTGGGGG CTCACCAGGC TCACAACGCG TCGGCCGCGG TGGCGGCGGG GCTGGCGGCT
GGGGTGCCCC TCGATGTGGC CGCGTCGGCG TTGGCCACCG CGTCGCTGTC GAAGTGGCGT
ATGGAACTGC GCGAACTCGA CAGTGGAGCG ACGTTGCTCA ACGACTCGTT CAACTCCAAC
CCGGACTCGA CTCGCGCGGC TTTGGACGCG CTGGCGGGGA TCGAGGGCGG GCGTCGGATC
GCGGTTCTTG GCGAGATGCT GGAACTCGGT GATGACCACG AGTCGGAGCA CCGTGCGGCC
GGGGAGTACG CCGCCGCCCG GGCCGACGTC GTGGTCGCGG TCGGCGGGAT CGCCAGCCTG
GTGGCCGACG GCGCGGGGGA CTCGGCGGTG GCGCTGCCTG ACAACGACGC GGCCATCGAC
TGGCTGCGCG GGCACATCAC GGCTGGGGAT GTGGTGCTGG TGAAGGCTTC CCGTGGCGTG
TTCCTGGACG AGGTCGCCGC CGCGCTCGTG TAG
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| Protein sequence | MVGMIPLSLG EIAVVVDGTV EGDGAVMVTA PAVLDGRQAE PGGLFVAFAG DRVDGHDFAE
QAGEAGAVAV LGSRPTSLST VVVKDVQAAV QALAAYVVGR LRDGLTVAGL TGSQGKTSTK
DLLATVVSST APTIAAVDSF NNEIGVPVTM LRADAASRFL VLEMGARRVG DIADLTGLVA
PDVAVVLNVG QSHLSYFGSR QAIAKAKGEL VRGLAPGGTA VLNADDPVVV AMRSLTNGPV
LTFGYAEHAD VRVVDLTLDR LSRPSFTLRT ADGSAFVELP LVGAHQAHNA SAAVAAGLAA
GVPLDVAASA LATASLSKWR MELRELDSGA TLLNDSFNSN PDSTRAALDA LAGIEGGRRI
AVLGEMLELG DDHESEHRAA GEYAAARADV VVAVGGIASL VADGAGDSAV ALPDNDAAID
WLRGHITAGD VVLVKASRGV FLDEVAAALV
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