Gene Snas_5352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5352 
Symbol 
ID8886561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5688329 
End bp5689528 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content66% 
IMG OID 
Productacyltransferase 3 
Protein accessionYP_003514079 
Protein GI291302801 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0176714 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0147975 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCG AGGTGTCCGC GCGCGGTGAG ACCCCCACGA CCGGAACCAA CGCCAAACCG 
GCGACCGCGA AGTCCGGCAA AGACCCCCTG CTGGACAACG CCAAAGTGGT CCTGATCGTG
TCGGTGGTGT GCGGCCACGC GTGGTCCCCG CTCCTGGACG ACAGCCACAC CGTCCGAGCG
ATCTACCTGA CGCTGTACGC CTTCCACATG CCCGCGTTCG TGATGCTCTC GGGCTACCTG
TCCCGCTCGT ACAACGGCCG CGAAAGCCAG CGCTACCGCG TGGTCTCCAC CCTCATCGTC
CCCTACGTGG TCTTCTCCCT CCTATACGGA GCGATGCGCT ACTGGACCGA GGACGAACTC
AACCCCGACC TCCTCAACCC CTTCTTCCAA CTCTGGTTCC TAGTAGCCCT ATTGGTTTGG
CGCCTAACAG CTCCAATATG GAAACTAGTC CGCTACCCCG TCCTCGTGGC CCTGGTCATC
TCCATCGGGG CCTCCACGAT GGACCTGCCC GGCGAACTGG ACCTCGGCCG ACTACTCCAG
TTCCTCCCCT TCTTCGTAGC GGGCCTCTTC CTCAAACGCG ACCACATCGA CGCCCTCCGC
CGCCCCCTCC CCCGCATCGC CCTGGCCACC GGCGCCGCCG CCATCGTGTG GGCCGCCTTC
GCGTTCGGCG GCGAGGTCGA CCGCCACTGG ATGTACCTCA ACGACGGCGC GAAACAACTG
GGCCTCACCT TCGGCGAAGC ATTCCTGATG CGCATAGTCC TGCTGGCCTG CGCGGTAACC
CTGATCGCCG CCTTCCTGGC CCTGATGCCC GGCAAACAAC GCTGGTACAC CGCCCTGGGC
GCGGCCACGA TGTACCCGTT CCTCCTGCAC GGCTTCTTCG TCAAGATCGC CGAGGACGGC
TTCAAGCTCT ACGAAAACGA CTTCATCAAC ACCGGCACCG GCGCCCTCAC CGTCACCGCC
TGCGCGATAA CCCTGGCCGC CCTCCTACTG AGCCGCCCCA TCCGCTGGCT CACCAAACCC
ATCGTCGAAC CCAACCTCGA CTGGCTCCTC AAACGCCCCC TCCAAGCGGC CAAACCCCGC
GCGACCCCAA CCCCCACACC ACCTCCCGCC CCACACCCAC CCACCGACGT GAACCACCCC
CGAACCCCGA CCTACCCCGA CACCAAGGAC GCCAAGGAAA CCCCACCCCC AACCACGTGA
 
Protein sequence
MSTEVSARGE TPTTGTNAKP ATAKSGKDPL LDNAKVVLIV SVVCGHAWSP LLDDSHTVRA 
IYLTLYAFHM PAFVMLSGYL SRSYNGRESQ RYRVVSTLIV PYVVFSLLYG AMRYWTEDEL
NPDLLNPFFQ LWFLVALLVW RLTAPIWKLV RYPVLVALVI SIGASTMDLP GELDLGRLLQ
FLPFFVAGLF LKRDHIDALR RPLPRIALAT GAAAIVWAAF AFGGEVDRHW MYLNDGAKQL
GLTFGEAFLM RIVLLACAVT LIAAFLALMP GKQRWYTALG AATMYPFLLH GFFVKIAEDG
FKLYENDFIN TGTGALTVTA CAITLAALLL SRPIRWLTKP IVEPNLDWLL KRPLQAAKPR
ATPTPTPPPA PHPPTDVNHP RTPTYPDTKD AKETPPPTT