| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5343 |
|---|
| Symbol | |
|---|
| ID | 8886552 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 5674104 |
|---|
| End bp | 5676926 |
|---|
| Gene Length | 2823 bp |
|---|
| Protein Length | 940 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | Endonuclease/exonuclease/phosphatase |
|---|
| Protein accession | YP_003514070 |
|---|
| Protein GI | 291302792 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.799398 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAATGG GTAGATCTCG TCTTGGCCGG ACGATCGCGG TGGTGTGTGC CGCGACGCTG
GCGGGAATCG CGTTCGGTGT GCCCCCGGTG GCGGCCGCGT CGTCCGATGT GGTGCTGAAC
GAGGTGTACG GCGGCGGCGG GAACTCCGGC GCCACCCTGA CCAACGACTT CATCGAACTG
ACCAATCGCG ACGGTGGGCC GGTCGACGTG TCCGGGTGGT CGGTGCAGTA CCACTCCGCC
TCGGCCACCG GATCGTGGCA GGTCACGCCG CTGACCGGCC AGGTCGCGCC GGGCCAGTTC
TACCTGATCG CCGAGGCCGC CGGCAGCGGC GGCACCCAGC CACTGCCCAC ACCGGACGTT
ACCGGCACCA TCCCGATGGG CGGCACCGGC GGCACGGTGG CGCTGGTCAA GTCGACCACC
GCGCTGACCT GTACCGCCGC CGACTGCGCC GGTGAGGCGT CGATCGTGGA CCTCGTCGGC
TACGGCAGCG CCGCGATCCG CGAGACCAAC CCGGCCGCGG GAGCTTCGAA CACGCTGTCG
GTGCAGCGCA AGGAAACCGG CGACACCGAC GACAACGCCG CCGACTTCGC CGCCGCCGAT
CCGACCCCCA AGGTGGCCAA CGACGGCGGC GACCCCGGAC CGGAGTGCCC GGCCGAACCG
GGCCCGAACC GGATCCACGA CATCCAGGGC GACGGCTGGA TCTCGCCGCT GCACGGCGAT
CCGGTCGCCG ACGTGCCCGG CGTCGTGACC GCGGTGCGGA CGCAGTCGCC GCGCGGCTAC
TGGATCCAGG ACACCGCGCC CGACTCCGAC GCCGCCACCA GCGAGGCCGT GTTCGTGTAC
GCGGGCTCCG CGCCGGTCAC CGTGCAGGTG GGGGACGCGG TCTCGGTGTC GGGCAAGGTA
TCCGACTTCT ACCAGCTGTC GTCCGGTGAG ACCTTCCCGA ACACCGCGAA CCTGTCCATC
ACCGAGATCA CCAATCCGGT GACGGCGGTG TGCTCGTCCG GGAATCCGTT GCCGTCGACC
GAGACCGTGG CCGCTGACTC CATTCCCGAC GTCTACGCGC CCACCGCGCC CACCGGCAAC
GTCGAGGACC TCAACCCGGT CGACGCGTCC CGATCCACCA TGGACTTCTG GGAGGCTCGC
GAGGGAATGC TGGTCTCGGT CTCCGATGCC CGGGTCGTGG GCCCCGGCAA CGAGTTCGGC
GAGATCTACC TGACCGTCAA ACCCGACGAG TACGCCTCCG AGCGCGGCGG CACCGTCAAC
ACCGGCTACG ACAACACCCC CACCGGCCGG ATCGTGGTCT TCCCGGTCTC CGGTTCGGTG
CCACCGGCCA ATGTGGGCGA CACGCTCACC GGCGCCACCT CCGGCCCGGT GGATTACTCG
CTGTACGGCG GTTACGGCAT CGCCGCCACC CAGGTGGGTG GCGTGGCGTC CGGCGGCATC
GACCGGCAGG TCGCCACCGC GCAGACACCG GAGCAGCTGG CCGTGGCCAC CTACAACGTG
GAGAACCTGA GCCCCAAGGA CTCCGGCGGC AAGTTCGCCG CGCTGGCCGA GGGCATCGTC
ACCAACCTGG CCGCGCCGGA CGTCGTCGTG CTGGAGGAGA TCCAGGACAA CAACGGCTCC
ACCAACGACG CCGTCGTCGA CGCCGACCAG ACCCTCGACA AGCTGACCGC CGCGATCACC
GCGGCCGGTG GGCCGCGGTA CGACTGGCGA CAGATCAGCC CCACCGACGA CGCCGACGGC
GGCCAGCCGG GCGGCAACAT CCGGGTGGCT TTCCTGTTCA ACCCGGACCG GGTGTCCTTC
GTGGACCGCG AGGGCGGCGA CGCGACCACC CCGGTCACCG TCGGCACCGA CTCCGACGGC
ACCCCGTCCC TGAACGTCTC GCCGGGCCGC ATCGACCCGG CCAACGAGGC GTGGAAGTCC
AGCCGCAAGC CGCTGGCCGG TGAGTTCCGG TTCAACGGCG AGAAGGTCAT CGTGGTGGCC
AACCACTTCA ACTCCAAGGG CGGCGACCAG AACGCGGACG GCCGGTACCA GCCGCCGGAG
CGCTCCACCG AGGTGCAGCG GATCAAGCAG GCCAAGGCGG TCAACGCCTT CGTCAAGGAC
ACGCTGGCCG TGGACGCCGA CGCCAACGTC GTGGTCGCGG GTGACATCAA CGACTACCAG
TTCTCCCCGG CGCTGGACGC GCTCACCGAC GGGGAGGTGC TGGAGGACCT GATCACCGGC
CTGCCGGACA CCGAGCAGTA CACCTATGTG TACAACGGCA TCTCGCAGGT GCTGGACCAC
ATCCTGGTCA GCCCGGCGCT GGCGAAGGCC GACTACGAGG TGGTTCACAT CAACGCGGAG
TTCGCGGAGC AGAACTCCGA CCACGATCCG CAGGTCGCGC GGCTCAACTT CCCGCCGAAG
TGCACCAAAA CGGTGTCGGG CAGGCACATC GGGCCGCTGA CGGTCAAGAA GGGCGTGACC
TGCCTGGACG ACGCGACCCA GATCGGCACC ATCACCGTCA AGGACGGGGC CAGCCTCCAC
GTCGTGGACA GCACCATCAC CGGACCGCTG AAAGCCGAGG GCGCCAAGTC GATCAGCCTG
TGTTCGTCCA AGGTGGTCGG AACGATCGCC ATCGACGGGT CGAGCGGGCC GGTGACGCTG
GGCGGCGACT GCGACGGCAA CCGGGTCGTG GGCCGGATCG GGCTCACCGA CAACACCGGC
GGGGTGACGA TCGTGGACAA CACGCTCGTC GGCTCGCTGG CCTGTACCGG CAACGACCCG
GCACCGACCG GGGAGGGCAA CAGGATCAGC GGATCCCGTA CGGGGCAGTG CAAGGAGTTG
TGA
|
|---|
| Protein sequence | MSMGRSRLGR TIAVVCAATL AGIAFGVPPV AAASSDVVLN EVYGGGGNSG ATLTNDFIEL
TNRDGGPVDV SGWSVQYHSA SATGSWQVTP LTGQVAPGQF YLIAEAAGSG GTQPLPTPDV
TGTIPMGGTG GTVALVKSTT ALTCTAADCA GEASIVDLVG YGSAAIRETN PAAGASNTLS
VQRKETGDTD DNAADFAAAD PTPKVANDGG DPGPECPAEP GPNRIHDIQG DGWISPLHGD
PVADVPGVVT AVRTQSPRGY WIQDTAPDSD AATSEAVFVY AGSAPVTVQV GDAVSVSGKV
SDFYQLSSGE TFPNTANLSI TEITNPVTAV CSSGNPLPST ETVAADSIPD VYAPTAPTGN
VEDLNPVDAS RSTMDFWEAR EGMLVSVSDA RVVGPGNEFG EIYLTVKPDE YASERGGTVN
TGYDNTPTGR IVVFPVSGSV PPANVGDTLT GATSGPVDYS LYGGYGIAAT QVGGVASGGI
DRQVATAQTP EQLAVATYNV ENLSPKDSGG KFAALAEGIV TNLAAPDVVV LEEIQDNNGS
TNDAVVDADQ TLDKLTAAIT AAGGPRYDWR QISPTDDADG GQPGGNIRVA FLFNPDRVSF
VDREGGDATT PVTVGTDSDG TPSLNVSPGR IDPANEAWKS SRKPLAGEFR FNGEKVIVVA
NHFNSKGGDQ NADGRYQPPE RSTEVQRIKQ AKAVNAFVKD TLAVDADANV VVAGDINDYQ
FSPALDALTD GEVLEDLITG LPDTEQYTYV YNGISQVLDH ILVSPALAKA DYEVVHINAE
FAEQNSDHDP QVARLNFPPK CTKTVSGRHI GPLTVKKGVT CLDDATQIGT ITVKDGASLH
VVDSTITGPL KAEGAKSISL CSSKVVGTIA IDGSSGPVTL GGDCDGNRVV GRIGLTDNTG
GVTIVDNTLV GSLACTGNDP APTGEGNRIS GSRTGQCKEL
|
|---|
| |