Gene Snas_5321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5321 
Symbol 
ID8886530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5651419 
End bp5652207 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content69% 
IMG OID 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003514048 
Protein GI291302770 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGACA GTCACTTCAC CCACGACAAC GCGACGATCG CCTACGAGCT CAAGGGTTCC 
GGTCGGCCGG TCGCCTACTC CCACGGCGTC CCGCTCAGCC GCGCCGCCGT CCGGGGCCTC
GACCTGTTCG ACTTCGACGC GCTGGCGAAA CAGCACCGGC TGCTGACCTA CGACCACCGT
GGACACGGTC AGTCCACCGG ACGCCCCGTC ACCGAGGACT ACCGCTTCGA GAACTTCGCC
GCCGACTTCC TGGCGCTGCT CGACGAGCTC GGCATCGACG AACCGCTGGA CTTCACCGGT
TCCTCACTGG GCGCCGACAC GGTGCTGCGC ACCGCGATCA CCGCGCCGCA CCGGCTGCGC
AGACTGGTGC TGATGATCCC GCCGGTGGCC TGGGACGAGG TCGCCGACCA GGCGAAACAG
TGGTACTTCG ACACCGCCGA CATCATCGAG AACAACGGCG CCGCCGCTTG GCGCAAGGAA
GCCGCCAACG CCGCCCCGCC GCCGATCTTC GCCGACTACC CGAAGTTCAG GTTCACCCCG
GACGTGTCCG ACGCGCTGCT GCCGTCCGTC CTGCGTGGAG TCGGTTCCTC GGACCTGCCG
GAGCCGGAGG CGATCGCGGG CATCCAGCAT CCCGTGCTGA TCCTGGCCTG GGACACCGAC
CCGCTGCACC CGGTGGCCAC GGCGGAGAAG CTGCGCGAGC TGCTGCCGCA TTCCACACTG
CACGTGTCCA CCACCGTGGC CGACGTCAAG ACCTGGACCG ACCGGATCAC CGGGTTTCTG
GCGGAGTGA
 
Protein sequence
MADSHFTHDN ATIAYELKGS GRPVAYSHGV PLSRAAVRGL DLFDFDALAK QHRLLTYDHR 
GHGQSTGRPV TEDYRFENFA ADFLALLDEL GIDEPLDFTG SSLGADTVLR TAITAPHRLR
RLVLMIPPVA WDEVADQAKQ WYFDTADIIE NNGAAAWRKE AANAAPPPIF ADYPKFRFTP
DVSDALLPSV LRGVGSSDLP EPEAIAGIQH PVLILAWDTD PLHPVATAEK LRELLPHSTL
HVSTTVADVK TWTDRITGFL AE