Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_5305 |
Symbol | |
ID | 8886514 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 5632080 |
End bp | 5633825 |
Gene Length | 1746 bp |
Protein Length | 581 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | serine/threonine protein kinase with PASTA sensor(s) |
Protein accession | YP_003514032 |
Protein GI | 291302754 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGCCCG GCACCTGTTT GGGAGATCGG TACACCCTCG AAGAGCACAT TGGAACCAGT GAACACGGCA GTGTCTGGTT CGGACGTGAC ACCGTGGTGG ACCGACCCGT CCGGATCAAG GTTCTCGACC CGCTCCTGGC CCGTGACGAG GAGGTTCGGG GCCGGTTCTG GCGCACCGCC ATGGCCATGG CGGAGCTGGA TGTGCCCGGC ATCGTCGACG TCTACGACTG TGTGGAACAG CGGGACGGGG ACGAGGTCAC GGTTTGTCAG ATCTCGGAGC GCCTTGAGGG GGAGACGCTG CGGAAGGTCC TGATCGAACG GTCGCTGGAG CCCGAGGACG CGCTGTCGCT TGTGGCCGGG CTCGGGTGGG CGTTGCAGTC CGCCCATGAG GCCGGGCTGC GGCACGCTAA CCTGAAGTCG TCGAACCTGA TCGTGGGGCC GGATTCGTCG GTGACGATCG TCGACTTCGG ATTCAGTGGT ACGGGGGCGG TGGCCGATGA CGTGTTCGCG TTGGGCGCCA TAGCCTATGA GTGCGTGACG GGGGCGCTGC CGTTCGTGGT GGTGCCCGAT GTGCCGCCGG TGGAGGCCGA GCGGCAGCCG TTGTCGCTGC CCGCCAACCT GGCCCCGGCG GTGGCCGCGT TCGTGAAACG GGCGCTGTCG ACCGATCCCG AGGTCCGGTT CGGTTCGGCG GCGATACTGG CCACCGAGTG CGAGCAGATC ACTTACACCA ACGACGTTTT GGGGCCGCTG CTGGAGCGGG GAGTGACCGA GCTGGACGGC GGCTCGGCAG CGGTCGCCAC TGTGGCGCTG GAACCTGGCG CGACGCCGTT GCCGCACCGT GAGGCCGAGG CCGCGCCGGA CGCGCCGGTG GGGCGGACGA TGGCCCGGTC GGCTCCTTCC TTGGTGTCGC AACCGAAGCG GCAACCGGTC GCCGCGCCGG TGGAGTCGGA GACCGCGGTC GTGCCGGTGC TGGAGGCCGC GTCCGATCCG GAGCCGAAAC CGGTGGCCGA GCCGGAGAAG GCGACGACCA AGGCCGCGCT TCCGCCGCCG CCGAAGGTCC GATCGAAGAT CACGCCGGAG TTCAAGGCCG CGCCGGCTGC GGCCGCCGAG CCGACCACCC GGCTGCGGGA CGCGGCCGCG CCGCCGCCGG TGTCGCCACC CCGGGAACGC AAGTCGCGCA AGCGGTTGGT GCTGGTGGCG GCGTTGCTGC TGCTCATCGG TACGGCGGGA GCGGTGGGCG TGTCGACGTT GACGACCGAC GGGTCGGTGT CCGCGACCGA CGAAGGCGGC GAAGCCGGCG GCGGGGGCGA CGGTGTCACG GAGTCCGACT CGGACGCGAC CTCGTCGAAG GACACGGAGT CCCAGGGGGG TGACAAGGCG GGCAACGAAC CGAGCAGCGC CGAGTCCTCG GGCAGTTCCT CGGCCTCGGA CGACGCCTCC CCGTCCGATG GGGACGAACC GGACGACAAC GACGAACCGG CGAAGGTGTC GGTGCCCAAT GTGGTGGGTC AGCATCCGTA CAAGGCGTAC CAGACGTTGA AGAACGCCGG GCTGAAGGTC AATGCCATCG AGTCCGGCAA GGGCGATCAC GCCTGCCCGG TCACCGACCA GAGCCCGGAC GGCGGCGCCA GCGTCAACGA GGGATCAACC GTGGACATCA TGTTCCGGAT GGTGCGGGAC CCCGACCGGT GTGACGGCAA CGACGGCGGC GGCGGAGGCG GGGACGACCA CGACGACCTC GACTGA
|
Protein sequence | MQPGTCLGDR YTLEEHIGTS EHGSVWFGRD TVVDRPVRIK VLDPLLARDE EVRGRFWRTA MAMAELDVPG IVDVYDCVEQ RDGDEVTVCQ ISERLEGETL RKVLIERSLE PEDALSLVAG LGWALQSAHE AGLRHANLKS SNLIVGPDSS VTIVDFGFSG TGAVADDVFA LGAIAYECVT GALPFVVVPD VPPVEAERQP LSLPANLAPA VAAFVKRALS TDPEVRFGSA AILATECEQI TYTNDVLGPL LERGVTELDG GSAAVATVAL EPGATPLPHR EAEAAPDAPV GRTMARSAPS LVSQPKRQPV AAPVESETAV VPVLEAASDP EPKPVAEPEK ATTKAALPPP PKVRSKITPE FKAAPAAAAE PTTRLRDAAA PPPVSPPRER KSRKRLVLVA ALLLLIGTAG AVGVSTLTTD GSVSATDEGG EAGGGGDGVT ESDSDATSSK DTESQGGDKA GNEPSSAESS GSSSASDDAS PSDGDEPDDN DEPAKVSVPN VVGQHPYKAY QTLKNAGLKV NAIESGKGDH ACPVTDQSPD GGASVNEGST VDIMFRMVRD PDRCDGNDGG GGGGDDHDDL D
|
| |