Gene Snas_5305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5305 
Symbol 
ID8886514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5632080 
End bp5633825 
Gene Length1746 bp 
Protein Length581 aa 
Translation table11 
GC content70% 
IMG OID 
Productserine/threonine protein kinase with PASTA sensor(s) 
Protein accessionYP_003514032 
Protein GI291302754 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCCCG GCACCTGTTT GGGAGATCGG TACACCCTCG AAGAGCACAT TGGAACCAGT 
GAACACGGCA GTGTCTGGTT CGGACGTGAC ACCGTGGTGG ACCGACCCGT CCGGATCAAG
GTTCTCGACC CGCTCCTGGC CCGTGACGAG GAGGTTCGGG GCCGGTTCTG GCGCACCGCC
ATGGCCATGG CGGAGCTGGA TGTGCCCGGC ATCGTCGACG TCTACGACTG TGTGGAACAG
CGGGACGGGG ACGAGGTCAC GGTTTGTCAG ATCTCGGAGC GCCTTGAGGG GGAGACGCTG
CGGAAGGTCC TGATCGAACG GTCGCTGGAG CCCGAGGACG CGCTGTCGCT TGTGGCCGGG
CTCGGGTGGG CGTTGCAGTC CGCCCATGAG GCCGGGCTGC GGCACGCTAA CCTGAAGTCG
TCGAACCTGA TCGTGGGGCC GGATTCGTCG GTGACGATCG TCGACTTCGG ATTCAGTGGT
ACGGGGGCGG TGGCCGATGA CGTGTTCGCG TTGGGCGCCA TAGCCTATGA GTGCGTGACG
GGGGCGCTGC CGTTCGTGGT GGTGCCCGAT GTGCCGCCGG TGGAGGCCGA GCGGCAGCCG
TTGTCGCTGC CCGCCAACCT GGCCCCGGCG GTGGCCGCGT TCGTGAAACG GGCGCTGTCG
ACCGATCCCG AGGTCCGGTT CGGTTCGGCG GCGATACTGG CCACCGAGTG CGAGCAGATC
ACTTACACCA ACGACGTTTT GGGGCCGCTG CTGGAGCGGG GAGTGACCGA GCTGGACGGC
GGCTCGGCAG CGGTCGCCAC TGTGGCGCTG GAACCTGGCG CGACGCCGTT GCCGCACCGT
GAGGCCGAGG CCGCGCCGGA CGCGCCGGTG GGGCGGACGA TGGCCCGGTC GGCTCCTTCC
TTGGTGTCGC AACCGAAGCG GCAACCGGTC GCCGCGCCGG TGGAGTCGGA GACCGCGGTC
GTGCCGGTGC TGGAGGCCGC GTCCGATCCG GAGCCGAAAC CGGTGGCCGA GCCGGAGAAG
GCGACGACCA AGGCCGCGCT TCCGCCGCCG CCGAAGGTCC GATCGAAGAT CACGCCGGAG
TTCAAGGCCG CGCCGGCTGC GGCCGCCGAG CCGACCACCC GGCTGCGGGA CGCGGCCGCG
CCGCCGCCGG TGTCGCCACC CCGGGAACGC AAGTCGCGCA AGCGGTTGGT GCTGGTGGCG
GCGTTGCTGC TGCTCATCGG TACGGCGGGA GCGGTGGGCG TGTCGACGTT GACGACCGAC
GGGTCGGTGT CCGCGACCGA CGAAGGCGGC GAAGCCGGCG GCGGGGGCGA CGGTGTCACG
GAGTCCGACT CGGACGCGAC CTCGTCGAAG GACACGGAGT CCCAGGGGGG TGACAAGGCG
GGCAACGAAC CGAGCAGCGC CGAGTCCTCG GGCAGTTCCT CGGCCTCGGA CGACGCCTCC
CCGTCCGATG GGGACGAACC GGACGACAAC GACGAACCGG CGAAGGTGTC GGTGCCCAAT
GTGGTGGGTC AGCATCCGTA CAAGGCGTAC CAGACGTTGA AGAACGCCGG GCTGAAGGTC
AATGCCATCG AGTCCGGCAA GGGCGATCAC GCCTGCCCGG TCACCGACCA GAGCCCGGAC
GGCGGCGCCA GCGTCAACGA GGGATCAACC GTGGACATCA TGTTCCGGAT GGTGCGGGAC
CCCGACCGGT GTGACGGCAA CGACGGCGGC GGCGGAGGCG GGGACGACCA CGACGACCTC
GACTGA
 
Protein sequence
MQPGTCLGDR YTLEEHIGTS EHGSVWFGRD TVVDRPVRIK VLDPLLARDE EVRGRFWRTA 
MAMAELDVPG IVDVYDCVEQ RDGDEVTVCQ ISERLEGETL RKVLIERSLE PEDALSLVAG
LGWALQSAHE AGLRHANLKS SNLIVGPDSS VTIVDFGFSG TGAVADDVFA LGAIAYECVT
GALPFVVVPD VPPVEAERQP LSLPANLAPA VAAFVKRALS TDPEVRFGSA AILATECEQI
TYTNDVLGPL LERGVTELDG GSAAVATVAL EPGATPLPHR EAEAAPDAPV GRTMARSAPS
LVSQPKRQPV AAPVESETAV VPVLEAASDP EPKPVAEPEK ATTKAALPPP PKVRSKITPE
FKAAPAAAAE PTTRLRDAAA PPPVSPPRER KSRKRLVLVA ALLLLIGTAG AVGVSTLTTD
GSVSATDEGG EAGGGGDGVT ESDSDATSSK DTESQGGDKA GNEPSSAESS GSSSASDDAS
PSDGDEPDDN DEPAKVSVPN VVGQHPYKAY QTLKNAGLKV NAIESGKGDH ACPVTDQSPD
GGASVNEGST VDIMFRMVRD PDRCDGNDGG GGGGDDHDDL D