Gene Snas_5280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5280 
Symbol 
ID8886489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5606599 
End bp5608296 
Gene Length1698 bp 
Protein Length565 aa 
Translation table11 
GC content72% 
IMG OID 
ProductHeat shock protein 70 
Protein accessionYP_003514007 
Protein GI291302729 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.465125 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGATC GGCTGGGCAT CGACTTCGGC ACCGCCAACA CCGTTGTCGC GCGGTGGAAC 
GACGCCACCG GAACCGGCGA GGCGATACCG CTGTCCGGTG TGGAGGTCGT GCGCGACGTC
GGGAACCTGC AACGGGTGGT GCCGTCGCTG ATCGCGTACT CCGCTGTGGA CGAGCGGCGT
TGGGTGGGAG CGCAGGTCAC GCCCGCGCTG CGCGCCTCGG ACGGGGTGCG GGTGTTCCGT
TCCACCAAGA CATCGGTGGC CGGACGCGTC GTCGACCTGC CCCGTCAGGT GGGACAGCGC
CGTATCACCG CCGCCCGCGC GGCCGCTGAC TTCCTCGGCG ACGTCATGAC TCTGGCGCGG
TTGGAGACCG GCACCGAGGC CGAGCTCGTG CTCACCGCCC CGGTGGAGTC GTTCGACCCG
TACCGGGACT GGCTGGTGCG GGAGGTCGGG GCGGATCTGG ATCGGCTGCG GATCGTGGAC
GAGGCGACGG CCGCCGCGGC CGGGTACGGC GCGAAGCTCA AACCCGGGGA TGTGTTCGGT
GTCTTCGACT TCGGCGCCGG AACCCTCGAC ATCTCGGTGG TCAGTGTCGT CGACCCCGAC
GGGCCACCGC CGAGCCCCGA CGCGCGGCCC GGGGCTGATC GCGGCTCGGC GGGCGGCGGT
CCGCCGCTCG CGGCCGGGCC CGCCGACGGC CGCCGACAAC CGACCCGGCT GTCGGGCTGC
GGCGTGCGCG TCATCAGCAA GGTCGGCATC GACCTGGGCG GCGACCACAT CGACGCGCTG
CTGGCCGACG AGGTCGCGCG GCTGACCGGA CTCGCCGAGG CCGACGCGTC CGTCCACAAT
CGAGTGTTCG CGGAACTGCT GACCGCCGCC GAGGCCGCGA AGGTCGCGCT GACCACGGCC
GAGTCCGCCG TCGTGGCCGC CGTCGACCCG CTCACCGGCC GCGAGTGGCG CGCCGACGTC
AGCCGCGACC GGTTCACATC GCTGTTGCGC GACAACGACA TCCTCGGCCG GATCGGCCGC
GCCTTCCGCA AGACCCTCGA CGCCGCCGCG GCCAAGGGCC ACCCTGCCGA CAGCCTGCGC
CACCTGTTCC TCGTCGGCGG CAGCAGCCTG CTGCCCCCGG TCCGCGAACT GCTGTCGTTC
CAGATCGACC CGGGACTGCT GCGGCTCGAC CGGCCGCTGG AGGCCGTCGC CGCCGGGGCC
GCCGCGATCG CCTCCGGCCA CGACCCGGTC GACTTCGTCC AGCACGACTA CGCGATCCGG
CACGTCTCGC AGACCACCGG CGGCTACGAG TTCGAACCCG TGGTGCCAGC CGGAACCGAC
TACCCCAGCA CCGAACCCGT CGCGTCCCTG ACCATCAAGG GCGTCCACGA GGGACAGACC
CGGCTGGGGC TGGCCATCTA CGAGACCGCC CACGCCAGCA CCCGCGACAC CGCCGCCGGA
CTGGAGATCA TGTTCGACAC CTCCGGCGGC GCCCGCACCG TCGCCGTCAG CCCGCAGCGC
CGCACCGAAC TGTCCCAGGT GTGGCTCAAC GAGGAACAGT TGACGTTCCT GAAAGCCGAA
CCGCCCGCCC GCGCCGGGAT CGACCGGTTC CGGTTGGAAT TCCACGTCGA CGCCCAGAAA
CGTCTCACCG TCTCCGCCTT CGATCTGGAA CGCCGGATCT GGGTACTCGA CCGCCAGCCC
GTCGTGGGCC TGGCCTGA
 
Protein sequence
MTDRLGIDFG TANTVVARWN DATGTGEAIP LSGVEVVRDV GNLQRVVPSL IAYSAVDERR 
WVGAQVTPAL RASDGVRVFR STKTSVAGRV VDLPRQVGQR RITAARAAAD FLGDVMTLAR
LETGTEAELV LTAPVESFDP YRDWLVREVG ADLDRLRIVD EATAAAAGYG AKLKPGDVFG
VFDFGAGTLD ISVVSVVDPD GPPPSPDARP GADRGSAGGG PPLAAGPADG RRQPTRLSGC
GVRVISKVGI DLGGDHIDAL LADEVARLTG LAEADASVHN RVFAELLTAA EAAKVALTTA
ESAVVAAVDP LTGREWRADV SRDRFTSLLR DNDILGRIGR AFRKTLDAAA AKGHPADSLR
HLFLVGGSSL LPPVRELLSF QIDPGLLRLD RPLEAVAAGA AAIASGHDPV DFVQHDYAIR
HVSQTTGGYE FEPVVPAGTD YPSTEPVASL TIKGVHEGQT RLGLAIYETA HASTRDTAAG
LEIMFDTSGG ARTVAVSPQR RTELSQVWLN EEQLTFLKAE PPARAGIDRF RLEFHVDAQK
RLTVSAFDLE RRIWVLDRQP VVGLA