Gene Snas_5250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5250 
Symbol 
ID8886459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5574163 
End bp5575566 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content69% 
IMG OID 
Productpeptidase S1 and S6 chymotrypsin/Hap 
Protein accessionYP_003513977 
Protein GI291302699 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATCG CCCGCGCCGT CGCCGTTGTG GCGGCGGCGA CCCTGCTCCT GTCCGCACCG 
CTGGCGGGCA CCGCCAGCGC CGATCCGCCC AAGTCCAAGG CCGCCAACCC GACCGACGAG
TTGCGCCCCG ACGACGTCGG CACCGACATC GTCAACGGCG AACTCGCCTC CTATACCGAA
CGACCCTCGC TCATCACCGG TCTGCGGGTC GGCGGCGGCG GACCGCAGGG TTCGTCGTGC
ACCGCCAGTG TCGTCGGCAA ACGGCAGATC CTCACCGCGG CGCACTGCAT GATCGACGTC
GGCGGAGCCA AGAGTTACCT GTACGGCGAC GACGATCTCA GCTCCGCCGG TGACGAGAAG
TGGAAGAGCC CCGTCACCAA GTTCACCCCG CATCCCGACT ACGGCGGGTC GGGCGGCTGG
CGCACCGGCT ACGACGTCGC GATCGTCGAG GTCGCCGACG ACATCCCGGT GCCCGAGAGC
GACTGGGCGA AGTTCGCCAC CTCCGCCGAC GCCGACCTGT CGCAGCCGGG CCGCGACTCC
CTGACCTACG GCTGGGGCAA GACCGCCGCC AACGGGACCA TGGGCCGGTT GAAGAAGACG
ACGCTGCCTA TCAACGACGC CGATTCCTGC CAGGTCTTCG ACGTCACCGT CAACCCCGAG
CTGATGATCT GCGCCGGGTA CGACGACGGT CGCACCGGCA TCTGCTCCGG TGACAGCGGC
GGCCCGCTGA TCGTCGACGG CGTCGTCATC GGCATCACGT CCTGGGGCGC CAGTGCCTGC
GACCGGTACA GCATCTTCGC CAGGCTCACC AACGCGATGG GTGACTGGGC GCACGAACAG
CTCCAGGCCC CGGCCGAGGA CGACTTCAGC GTCTCGTTGA GCCCCGACTC GGCGACCGTC
GAACCGGGAC AGTCCACCGA GACCACCGTG TCCACGAAGG TCTCGCGCGG CAGCGCCCAG
GACGTCTCGC TGACCGCCAC CGGACTGCCC GACGGCGCCG AGGCGACGTT CTCGCCGTCG
GCGATCCGGT CGGGCGAGTC GGCGAAACTG TCCGTGTCCA CCTCGTCCGA CACTCCACAA
GGAACCCACC GGATCACCGT CACCGCCGAC GGCGCCAAGG TCGACCGCAC CGCGGTGTTC
ACGCTCCAGG TGGGCGAGGA CGGCGAGGGG CCGACGGCCG ACTTCACCGC GCAGTGTTTC
AGCGGCCCCG GCGTGTGCTT CTTCAACGGC CAGGGCTCCA AGGGCGAGAT CGCCTCGTAC
CGCTGGACTT TCGGTGACGG CGGCACCGGC CAGGGACAGC TCGTCCACCA CTGGTACGCC
GCCGCCGGTC AGTACCGGGT GACCCTCACG GTCACCGACT CGCGCGGCGG ATCACACAGC
ACCACCAAGA CCATCACCGT CTAA
 
Protein sequence
MRIARAVAVV AAATLLLSAP LAGTASADPP KSKAANPTDE LRPDDVGTDI VNGELASYTE 
RPSLITGLRV GGGGPQGSSC TASVVGKRQI LTAAHCMIDV GGAKSYLYGD DDLSSAGDEK
WKSPVTKFTP HPDYGGSGGW RTGYDVAIVE VADDIPVPES DWAKFATSAD ADLSQPGRDS
LTYGWGKTAA NGTMGRLKKT TLPINDADSC QVFDVTVNPE LMICAGYDDG RTGICSGDSG
GPLIVDGVVI GITSWGASAC DRYSIFARLT NAMGDWAHEQ LQAPAEDDFS VSLSPDSATV
EPGQSTETTV STKVSRGSAQ DVSLTATGLP DGAEATFSPS AIRSGESAKL SVSTSSDTPQ
GTHRITVTAD GAKVDRTAVF TLQVGEDGEG PTADFTAQCF SGPGVCFFNG QGSKGEIASY
RWTFGDGGTG QGQLVHHWYA AAGQYRVTLT VTDSRGGSHS TTKTITV