Gene Snas_5247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5247 
Symbol 
ID8886456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5572559 
End bp5573149 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content68% 
IMG OID 
Productisochorismatase hydrolase 
Protein accessionYP_003513974 
Protein GI291302696 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.860702 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGCA CGACCCTGCG CGACATCAGC CAACTCGACC AGACCCCGGC AGCGCTGTCC 
GAGGCGACGC TGATCCTGAT CGACATCCAG AACACCTACA CCCGGGGCGT CATGGAGCTC
ACCGGCTGGC AGCCCGCGCT CGACGCCGCC GCCGAACTGC TGGCCAACGC CCGCGCCGCC
GGAGCGAAGA TCGTCCACGT CGCCCACGAC AGCGGCGAGG GAAGCCCGTT CGACGTCAAG
GCCGACATCG GCCAGATCCA CCCGAAGGTG GCGCCGATCG ACGGCGAGCC GGTCGTCGTC
AAGACCGCCC CCAACAGCTT CGTCGACACC GACCTCGACG AGCAGCTGAA GGCGGCGGGC
AACACCGACG TCATCATCGT CGGGTTCATG ACGCACATGT GCGTGACCTT CACCTCCGAG
GGCGCGTTCC TGCGCGGCTA CAAGCCGACG GTCGTGGCGG ACGCCTGCGC GACCCGGCCG
CTGAAGACGG CGGTCGCCGA GGTCTCGGCG CAGCAGCTGC ACCACAGTGC TTTGGCGACG
ATCAACGACA TCTACGGGGT TGTCGTCGCG TCCGCGTCCG AACTGAGGTA G
 
Protein sequence
MSSTTLRDIS QLDQTPAALS EATLILIDIQ NTYTRGVMEL TGWQPALDAA AELLANARAA 
GAKIVHVAHD SGEGSPFDVK ADIGQIHPKV APIDGEPVVV KTAPNSFVDT DLDEQLKAAG
NTDVIIVGFM THMCVTFTSE GAFLRGYKPT VVADACATRP LKTAVAEVSA QQLHHSALAT
INDIYGVVVA SASELR