Gene Snas_5246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5246 
Symbol 
ID8886455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5571427 
End bp5572422 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content70% 
IMG OID 
Producttranscriptional regulator, AraC family 
Protein accessionYP_003513973 
Protein GI291302695 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.893549 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCACCA TCGACCGCCT CATCGTCATC GCGCTGTTCG ACCGCGTCGA CCTGCTCGAC 
GTCACCGGAC CGCCGGAGGT GTTCTCGCTG CTGCAACGCG AACTGGACGA ACCGAGCGGC
TACCGGGTGG TCCTGGCCGC GCGCAGCCTC GACCCCGTAA CCACCTCGGC CGGGGTGCGG
GTTCTTCCCG ACCTCACCTT CGACGACGTA TCCACAAAGG CCATCGACAC GCTGGTGGTG
CCCGGCTCGG TCGACACCGA CACCGACCGC CGGGTCCGCG CCCTGGCCGA TCCGGAGGTC
GTCGAGTGGG TGCGGCGCCT GGCCCCCAAC ACCCGCCGGG TCGCCTCGGT CTGCGTCGGC
GCCCACATCC TCGCCGCCGC CGGGCTTTTG GACGGCCGAC GCGCCACCAC CCACTGGTCC
ACCGCGCAAC AGCTCGCCAC CGAACACCCG TCGGTCACAG TGGACGCCGA CCCGATCTTC
ATCCGGGACG GCGACGTGTG GACCGGCGCG GGTCTGAGCG CCTGCCTCGA CCTGGCGCTG
GCCCTGGTCG CCGACGACTT CGGCGAGACA CTGGCGCTGG GCGTGGCCCG GCAGCTGGTG
ATGTACCTCA AGCGCCCCAG CGGACAGAGC CAGTTCAGCG TCTCGCTCGA CCCGGTCTCG
ACCACCCGCC GCATGGACCA GCTGCGGCTC CACATCACCC GCAACCTCGC CAAGCCGCTC
AACGTCGGTG AACTGGCCCG GCACCTCCAC GTCAGCGAAC GCCACGTGAC CCGGGTCTTC
AAGACCGAAC TGGGAACCAC CCCGGCGGCC TACATCGAAT CGGCCCGCGT CGAGGCCGCC
CGCAACCGGC TGGAGACCAC CGACGACACC CTGGAACGGG TCGCGACCGG CTGCGGCTTC
AACACCGTCG ACACGCTCAC CCGGGCGTTT CGGCGGCAGC TCAACACCAC CCCGACCGAG
TATCGCAACC GGTTCCGGCT CACCCCGCGA AGCTGA
 
Protein sequence
MGTIDRLIVI ALFDRVDLLD VTGPPEVFSL LQRELDEPSG YRVVLAARSL DPVTTSAGVR 
VLPDLTFDDV STKAIDTLVV PGSVDTDTDR RVRALADPEV VEWVRRLAPN TRRVASVCVG
AHILAAAGLL DGRRATTHWS TAQQLATEHP SVTVDADPIF IRDGDVWTGA GLSACLDLAL
ALVADDFGET LALGVARQLV MYLKRPSGQS QFSVSLDPVS TTRRMDQLRL HITRNLAKPL
NVGELARHLH VSERHVTRVF KTELGTTPAA YIESARVEAA RNRLETTDDT LERVATGCGF
NTVDTLTRAF RRQLNTTPTE YRNRFRLTPR S