Gene Snas_5243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5243 
Symbol 
ID8886452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5566788 
End bp5567849 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content62% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003513970 
Protein GI291302692 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.367518 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGCCCCC CTCTGCGCAA AAAACGAGCA ATCGTCATAT TCACCACCAT GGCCGCCATG 
ATCGCCGCGG CCGCGATCGG CATTCCGGTC TTCGCCGACA CCAACGATTC GGGTGACCGC
GACTGCCAGG TCAGCGAGAT CCTCGTCAAC GAGTGCCGTC CGTGGCTGGG AGCCCGGGCC
TCGGACTACC CCCAGGCCGA CGACTCGGTG ACCGAACAGG TCGCCCACCA CGAGGAGCGG
ATCGGAAAAC CGCTCGACAT CGTCCACACC TTCGCCGCCG AAGGCCAGCT GCCGCTGCGG
ACCAAGGAGG AACGTGCCCT GGCCAACCGC GAGGACACCT ACCTCTACCA GAACTGGAAA
CCGGCGGCCA AGTGGAAGGA CGCCGCCGGT GGTGACGCCG AAATGGATGA ACACATCGAC
GCGGCGGCCG ACAACATCGC CGAGGTGGCG CCCAAGAAGA TCTTCCTCAC CATCCACCAC
GAGCCGGAGA ACGACGTCAG CTCCGACTCC GCATGCGACA CGAAGGAGGA CGCCGCCGCC
GGAACCGCCG CCGACTACCG CGACATGTGG CACAACGTGC GGGAACGCTT CGACGCCAAG
GGCATCGACA ACGTCGTGTG GGTCATGGAC TACATGAACT ACGAAGCCTG GGACTGCCTG
GTGCCGAAGC TGTACCCCGG CGACGAATAC GTCGACTGGG TCATGTTCAA CGCCTATGGC
GACGGCAACA AAGCCGACTT CGCCGAGAAC GTCGGACGTT TCTACGATCT CCTCAACGGA
TTGAGTTCAG AGGAAATGGA TCTGAAGTCC AAACCGTGGG GAATCGTCGA ATGGGGAATG
AGCGATTCCA CCCAGGAACA GGCGCGCGAT TACTACGAAC AGGCCGCCAC GGCGGTGGAG
AAGAATCAGT TCCCGAAACT GTCCTCATAC ATGATTTTCG ATTCACCCGG CACGCATGAG
GACGGCGGAC TTCGGGTCGG CTACGACGAC AAGGGCAAGG CCGACGCCGA GGAACAGAAG
CGCTACACCG AGTTCGCCAA CAACCCGGTA TTCGAGGGCT GA
 
Protein sequence
MRPPLRKKRA IVIFTTMAAM IAAAAIGIPV FADTNDSGDR DCQVSEILVN ECRPWLGARA 
SDYPQADDSV TEQVAHHEER IGKPLDIVHT FAAEGQLPLR TKEERALANR EDTYLYQNWK
PAAKWKDAAG GDAEMDEHID AAADNIAEVA PKKIFLTIHH EPENDVSSDS ACDTKEDAAA
GTAADYRDMW HNVRERFDAK GIDNVVWVMD YMNYEAWDCL VPKLYPGDEY VDWVMFNAYG
DGNKADFAEN VGRFYDLLNG LSSEEMDLKS KPWGIVEWGM SDSTQEQARD YYEQAATAVE
KNQFPKLSSY MIFDSPGTHE DGGLRVGYDD KGKADAEEQK RYTEFANNPV FEG