Gene Snas_5233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5233 
Symbol 
ID8886442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5558832 
End bp5559650 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content55% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003513960 
Protein GI291302682 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.610741 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.357314 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGATA ACCCACTGCT AACGCGGAAA CAGCTCGGCA AGATGCTTCG GGAGCTTCGA 
CTGTCGTCGG GTAAGACGGT GGAAGACATC GAGTACTTCG GCAAGCTGTG GAAGAAGTCC
AAGCTGTATG CCATCGAGAA TGGCCACCAG CCGAACCCGT CGTGGCCGGA GGTCGAAGCT
GTCGCGAAGT TCCTCGGGGC GAGTAATGAG CTGACGCGGG AACTTGTCAG GATGGCGAAA
GCGTGTCTCA ACTCGGGCTG GTACGTGCCG TTTGATATTT CGCAGAAGTT CCAGACTTAT
CTCGACCTCG AAAGCGCCGC GAACCGGCTT CACTTCGTGG AGATTGAGAT GGTCAACGGA
CTCTTCCAGA CGGAGAACTA CACAAGGGCG CTACAACGGG CGTTGGGAGT TCCTGAGGAG
AAGATCCAGA ACTATGTCGA CTTCAGGATG CAGAGGGCAC AGCGGTTCTG GAACCGAGAC
CCGTTTCCGG AGGTGACGTT GTTGATGAGC GAGGGGACCC TTCGCAGGGT TGTCGGCGGT
GCCGAAGTCA TGGCCGAGCA GGTTGATCAC CTGCGTGAGC TTGCTCGACG TGATTTGGTT
GACATTGTGG TCATTCCGTT TGCGGCGGGT CTAAACGCGG CGATGCAGAA CGCGTTCACT
CTTTTGGAGT TCAATGATGA TGTGTATCCC GAGGTCGCTT ACGTAGAATC GCGGTCCGAG
TGCCAGTATC ACGAGCGTAA GCCCGTAGTG GCACTGTATA AGTGGATCCT CCAAGAAGCG
CTATCTGTAG CTTTGCCGAT AGGAGAAATT GAACTATGA
 
Protein sequence
MTDNPLLTRK QLGKMLRELR LSSGKTVEDI EYFGKLWKKS KLYAIENGHQ PNPSWPEVEA 
VAKFLGASNE LTRELVRMAK ACLNSGWYVP FDISQKFQTY LDLESAANRL HFVEIEMVNG
LFQTENYTRA LQRALGVPEE KIQNYVDFRM QRAQRFWNRD PFPEVTLLMS EGTLRRVVGG
AEVMAEQVDH LRELARRDLV DIVVIPFAAG LNAAMQNAFT LLEFNDDVYP EVAYVESRSE
CQYHERKPVV ALYKWILQEA LSVALPIGEI EL