Gene Snas_5229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5229 
Symbol 
ID8886438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5555951 
End bp5557123 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content62% 
IMG OID 
ProductRieske (2Fe-2S) domain-containing protein 
Protein accessionYP_003513956 
Protein GI291302678 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.395256 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.666696 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCATG ACGAACAAGT AGCGATTGTC AAACGCCTTC TGGCCCTTCG GGAATCGCGT 
CGCGATCAAG AGATGTTCGA CGAGGTCAAA ACGATCCCGG TCAGCAAGTA CACCGACACC
GCGCTGCTGG ACCAGGAACT CGCCTCGGCT TTCACCCGGT ATCCGTTGAT CGCCAGCCAT
ACCGCGGCGC TGCGGGAACC GGGTTCCTAC GTGGCCAGCG ATTGGGATCA ATTTCCCTAT
GTCGTGGTCC GGGGCGAGGA CGGGAAGGTC CGGGGCTTCT ACAACCAGTG TCGTCACCGC
GGTGCCCGGC TGTTGTCGGA ACGCTCCGGC GCGATCAAGA ACTTCATCTG CCCGTTCCAC
GGTTGGGTCT ACGGCCTGAA CGGGGAGCTG AAGGGAATCA CCCGCTCCCA GGATTTCCCC
TGTGTGGACA AGTCCGACTA CGGACTGGTG GAGTTGCCGG TCACCGAGTC CGGCGGGTTC
GTGTGGATCT CCCGCACCCC AGACGCGATC AGCGACATCC CGGCCTTCAT GGGCCGCTTC
CACGACGACC TGGAGAGCTT CGAGGTCGCC AACCTGGTGC GGTACAAGAA GACCAAGGTC
GTCAAGAACG CCAACTGGAA GCTGCTGATC AAGACCTACC TTGAGGGCTA CCACGTCCCC
TACCTGCACC GGGACACGCT GGCGACCGCG TTCAAGCGGG GACAGCTGGC CTACGACAAG
GACGGGCCGC ACATCCGGAT GATGGCGGGG CGGACGAACC TCACCGACAT CACCGCCAAA
CCCGAAGCCG AGTGGCGGAT CCTCGACCAC GTGTCGATCT ACTACACCCT GTTCCCGAAC
ACCTTCTTCA TCCTCCACCC CGACTACGTC TCGGTGAACA CGTTCTGGCC GCAGGCCCCG
GACCGGACGA TCTGGACCCA CGAGATGCTC TACCGGGCCG AGGACTTCAA CGGTTCGAGC
GGACAGAGCG CCCTGGAGAA GCGGTTCCGG TTCACCAATG ACACAGTGTT CGATCAGGAA
GACTTCGCCA TCGCCGAAGA GGTGCAGCGC AACCTGCTGC ACGGCGGCAG CGACCACCAC
GTACTCGGAC TCTCGGAGGG CTTGCTGGCC ATGTTCCAGG ACAACATCGA TGAACGTCTG
GCCATTCACG CGGCACAGGG GACGGAGCGA TAG
 
Protein sequence
MKHDEQVAIV KRLLALRESR RDQEMFDEVK TIPVSKYTDT ALLDQELASA FTRYPLIASH 
TAALREPGSY VASDWDQFPY VVVRGEDGKV RGFYNQCRHR GARLLSERSG AIKNFICPFH
GWVYGLNGEL KGITRSQDFP CVDKSDYGLV ELPVTESGGF VWISRTPDAI SDIPAFMGRF
HDDLESFEVA NLVRYKKTKV VKNANWKLLI KTYLEGYHVP YLHRDTLATA FKRGQLAYDK
DGPHIRMMAG RTNLTDITAK PEAEWRILDH VSIYYTLFPN TFFILHPDYV SVNTFWPQAP
DRTIWTHEML YRAEDFNGSS GQSALEKRFR FTNDTVFDQE DFAIAEEVQR NLLHGGSDHH
VLGLSEGLLA MFQDNIDERL AIHAAQGTER