Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_5216 |
Symbol | |
ID | 8886425 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 5541136 |
End bp | 5542032 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | UspA domain-containing protein |
Protein accession | YP_003513943 |
Protein GI | 291302665 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.366232 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.453672 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGTTC CCGCTCCCGT CGCCGTCGGG TTCGACGGCT CCGCAGCCAG TCAGGTCGCC GTGCGGTGGG CGACGACCGA GGCCCGACTG CGGCAACGGC CGCTGCTCAT CGTGCACGCG TTCCTGGCCC TGGCGCCGCT TCGGTCCGAT TCCCCCGAAG CCGAGGCCGC GGCCGTCCGG CGCGCCGTCG GTGAACTGCT CGAAGCCGAG GTCACCCGGG TCCGTGAACT GGCTCCCGAC CTGGACGTCA GTGGTGTGCT CGTCAACGGC CTGACCGCGA GCAACACCCT CGTGGACATG TCGCGCAGCT GTGAACTCAT GGTCGTGGGC ACCCGGGGCC GCAACGGCCT GACCGGCCTG CTGCTGGGTT CGGTGGCGAC CCAGGTCGTC GAGCACGCGT GCTGCCCGGT GCTCGTGGCC CGGCCCGGCG CGGACGAGGC GACCCCACCC GACGGCCGGG TGGTGGTCGG TGTGGACGGT TCGACCCTGT CCCACGAGGC GCTGCGGTTC GGCTTCGAGG AGGCTTCGAT GCGCGGCGCC GAGCTGCTGG CGGTCCACGC CTGGCGACAC CCGGCTTCGC TGGCCGGTGG CGACCTCGTC ACGCTGGTGC GCGACGAGGC CGAACTGGCC GACGAGAAGG AGCGGCTGTT GGCCGACTCG CTCGCGGGCT GGGAGGAGAA GTACCCCGAC GTGACGGTCC TGCGCCAGCT GACGCACGGC GATCCCCGCC AGGTCCTCAA GGACGCCTCC GCGGGCGCGC TCCTGCTGGT GGTGGGGGCG CGCGGGCTCG GCGGTTTCGC GGGGCTGCTG CTGGGATCCA CCAGCCAGAC CCTGGCCCAC CACGCCCACA GTCCGGTGGC GATCGTGCAC CCGGGCCGCT CCGGGTACCG GCGGTGA
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Protein sequence | MPVPAPVAVG FDGSAASQVA VRWATTEARL RQRPLLIVHA FLALAPLRSD SPEAEAAAVR RAVGELLEAE VTRVRELAPD LDVSGVLVNG LTASNTLVDM SRSCELMVVG TRGRNGLTGL LLGSVATQVV EHACCPVLVA RPGADEATPP DGRVVVGVDG STLSHEALRF GFEEASMRGA ELLAVHAWRH PASLAGGDLV TLVRDEAELA DEKERLLADS LAGWEEKYPD VTVLRQLTHG DPRQVLKDAS AGALLLVVGA RGLGGFAGLL LGSTSQTLAH HAHSPVAIVH PGRSGYRR
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