Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_5207 |
Symbol | |
ID | 8886416 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 5528114 |
End bp | 5529970 |
Gene Length | 1857 bp |
Protein Length | 618 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | serine/threonine protein kinase with WD40 repeats |
Protein accession | YP_003513935 |
Protein GI | 291302657 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.517469 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.176655 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATGGATG AACTGCGACC GGCCCAGGTC GGCCCGTACC GCCTGACGGC ATCGCTGGGC GCCGGTGGCA TGGGAGAGGT GTTCCTGGGG GTTTCGCCGG ACGGCGGCAA GGTCGCGGTG AAACTGCTGA ACCCGGACCT GGCCGACAGC GCCGTGTACC GCGAGCGCTT CGCCCGGGAA ATCGCCGCCG CCAAACGGGT CAGCGGACGC CACACGGTGC GGGTCGTCGA CGCCGACCCC GAGGCCGAGT CGCCGTGGCT GGCCACCGAG TACGTCCCGG GCCCGACGCT GCATGAGCTG GTGCGCGACG ACGGCGTCCT GGACGCGGCG GCGTTGCGAC AGCTGGGCGC CGCGCTCGCC GAAGGGCTCA CGGCCATCCA CTCCCACGGA CTGGTGCACC GGGATCTCAA GCCCGGCAAC GTGATCATGG CCGCCGACGG TCCCCGGATC ATCGACTTCG GTGTCGCCCA GGCCGCGGAC GCCAGCACCC TGACCGGAAC CGGCGCGGTC GTGGGAACCT ACGCCTTCAC GTCCCCCGAA CAGATCCGCG CGGACCAGTC CGGCCCCGCC AGTGACGTGT TCACATTGGG CAGCGTGCTG GTCTTCGCCG CGACCGGCAG GAGCCCCTTC GACGCCAGTA CTATCCCGGT GATCGTGCAC CGCATCCTCA GCCAGACACC GGATCTCGAC GGGGTTCCCC GCGACCTGCG ACGGTTGATC GGCGATTGCC TGGCCAAGGA CCCCGCCGCC CGGCCCAGCC CCGCGGTCGT CGCGAGCGTG TTGTCCGGCG ACCTCGACGC GACGACCCTC GAAGCCACCA GAGTGGAATC GCGCCCCGTC GAGCGGCCGC GCGGAGTCAG CCGTCGCGGC CTGATCGTCG GCGGTGCCGG GATTGTGGCA ACCGCCGTCG TCGCGGTGCC GACGATCCTG CTGCGGTGGA ATTCCACAGC GGACGGCACC GATTCCAAGC CGTACGCCAC GCTGTCCGGA CACAAGGGCG GCATCGCGGC GGCGATCTTC TCCGTTGACG ACAAGACGAT CGCCACCGGC GGTGCCGACA AGTCGATCCG GCTGTGGAAT GTCCCCAACG GAGAGCAGGT CGGCAAGTAC ACCGGCCACA CCGACGGTGT GACGTCGCTG TGTTGGGACC CCGAGGACCA GAACCTCCTG ATCAGTGGTG GCCGGGACGG CACGGTCCGA ATGTGGGACC TGGAAGGCGG CCTCCTGGAA CAGGTCAACG AGATCGGGAA CCACGCGGTC ACCGGCGTCG CCTACGACAG CAGCACGAAT CTCGCCAGCG GCCTGGACAA CGGTGAAGTC CGGCTGTGGC ACAACAACGC GTCCTCCGGC GCCCAGGTCC TCACCGGACA CACCGGAAGG GTCACCTCGG TGGCGACCAC ACTGCTCAAC ACCGGCGGGA ACAACACGCC GATCGCGATC AGCGCCGCGG CCGAGGGCAA GGACAGCGCC CTTCGGATCT GGAACATGGA TACCGGTAAG CGGCTCGCCG TACTCGCCGG ACACACCGAC GACGTCCTGA ATGTCGCCGC CAGCCGAGAC ATGGGATACG TGGCCAGCGC CAGCAAGGAC AAGACCGTCA GGCTCTGGGA TCCGGCGGCG GGTAGCTCGG TCGGCATCCT CAAGGGACAC TCCGGCCCCG TCTACGGAGT GGCCTTCGAC AACGCTCAGG AAACGCTCGC CAGCGGCAGC GTCGACGGAA CGGTTCGACT GTGGAAGGTC AGCACCGGCG AACACCTCAC CACCCTCACC GGCGGCCCCG AACACCCCAG CGCGCTGGCG ATCAGCGGCG ACGGAACGAC CGTCATCGCC GGCGACAGAC TGTGGAGGCT TACATGA
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Protein sequence | MMDELRPAQV GPYRLTASLG AGGMGEVFLG VSPDGGKVAV KLLNPDLADS AVYRERFARE IAAAKRVSGR HTVRVVDADP EAESPWLATE YVPGPTLHEL VRDDGVLDAA ALRQLGAALA EGLTAIHSHG LVHRDLKPGN VIMAADGPRI IDFGVAQAAD ASTLTGTGAV VGTYAFTSPE QIRADQSGPA SDVFTLGSVL VFAATGRSPF DASTIPVIVH RILSQTPDLD GVPRDLRRLI GDCLAKDPAA RPSPAVVASV LSGDLDATTL EATRVESRPV ERPRGVSRRG LIVGGAGIVA TAVVAVPTIL LRWNSTADGT DSKPYATLSG HKGGIAAAIF SVDDKTIATG GADKSIRLWN VPNGEQVGKY TGHTDGVTSL CWDPEDQNLL ISGGRDGTVR MWDLEGGLLE QVNEIGNHAV TGVAYDSSTN LASGLDNGEV RLWHNNASSG AQVLTGHTGR VTSVATTLLN TGGNNTPIAI SAAAEGKDSA LRIWNMDTGK RLAVLAGHTD DVLNVAASRD MGYVASASKD KTVRLWDPAA GSSVGILKGH SGPVYGVAFD NAQETLASGS VDGTVRLWKV STGEHLTTLT GGPEHPSALA ISGDGTTVIA GDRLWRLT
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