| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5201 |
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| Symbol | |
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| ID | 8886410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 5522329 |
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| End bp | 5523510 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | |
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| Product | putative RNA polymerase sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003513929 |
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| Protein GI | 291302651 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.603065 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.598241 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGTCCGCC GCTACGGCCA CTTCGACGAG AGCGAGGACG CCGTCCAGGA GGCGCTGCTG
ACCGCCGCCA CCCGCTGGCC CACCGACGGC CTCCCCGACA ACCCGCGCGC CTGGCTCATC
ACCGTCGCCT CCCGCCGGCT CACCGACCAG CTGCGCAGCG ACGAGGCCCG CCGCCGCCGC
GAGGACACCG TCGCGGCCCG CCAGCTCCCC GAGGACACCC AGGCCCCCGC CGCCGACGCC
CCCGACACCA ACGCGGACGA CACCCTGATC CTGCTGTTCA TGTGCTGCCA CCCCTCGCTG
ACGGCCGCGT CCCAGATCGC CCTGACCCTG CGCGCGGTCG GCGGTCTGAC CACCGCCGAG
ATCGCCCACG CCTTCCTGGT CCCCGAAGCG ACCATGGCCC AACGCATCAG CCGCGCCAAA
CAACAGGTCA AGGCGTCCGG GCTGCCCTTC CAAATGCCAC CGGCACCCGA GCGGGCCGCG
AAACTGGGCG CCGTGCTGCA CGTCCTCTAC CTGATCTTCA ACGAGGGCTA CACCGCCACC
TCCGGCCCCA ACCTGCGACG CGCGGAACTG TCGAACGAGG CCATCCGCCT CACCCGAGCC
GTCCACCGAC TGCTGCCCGA CGACGGCGAG GTCACCGGCC TGCTGGCCCT GATGCTGCTG
ACCGACGCCC GCCGCGACGC CCGCAACACC GCCACCGGCG ACCTCGTCCC ACTCGCCGAC
CAGGACCGCT CCCGCTGGGA CCGGCGATCC ATCGCCGAAG GCGTCGACCT CATCAGCCAC
GCGCTGGCCA CCGCGCCCCC TGGCCCCTAC CAGGTCCAGG CCGCGATCGC CGCCATCCAC
GACGAGGCCC CCAGCACCGA AGCCACCGAC TGGCCCCAGA TCGTCGCGCT GTACGCCGTC
CTGGACAACC TGGCCCCCGG CCCCATGGTC ACCCTCAACC AGGCCGTCGC CGTGGCCATG
GTGGACGGAC CCCGGGCCGG GCTGGAACTG TTGTCCCGCC TCGACGACGA CCCCCGCATG
GCCCGGCACC ACCGCCTGGA GGCCGTCCGC GCGCATCTCT ACGAAATGGA CGGTGACCCC
GCCGCCGCCC GCGCCGCCTA CCTCGCCGCC GCCACCCTCA CCACGAGCCT CCCCGAACAG
GACTACCTGC GCTGGCGGGC CGACAAGCTG CCCGAATCGT GA
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| Protein sequence | MVRRYGHFDE SEDAVQEALL TAATRWPTDG LPDNPRAWLI TVASRRLTDQ LRSDEARRRR
EDTVAARQLP EDTQAPAADA PDTNADDTLI LLFMCCHPSL TAASQIALTL RAVGGLTTAE
IAHAFLVPEA TMAQRISRAK QQVKASGLPF QMPPAPERAA KLGAVLHVLY LIFNEGYTAT
SGPNLRRAEL SNEAIRLTRA VHRLLPDDGE VTGLLALMLL TDARRDARNT ATGDLVPLAD
QDRSRWDRRS IAEGVDLISH ALATAPPGPY QVQAAIAAIH DEAPSTEATD WPQIVALYAV
LDNLAPGPMV TLNQAVAVAM VDGPRAGLEL LSRLDDDPRM ARHHRLEAVR AHLYEMDGDP
AAARAAYLAA ATLTTSLPEQ DYLRWRADKL PES
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