Gene Snas_5197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5197 
Symbol 
ID8886405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5518563 
End bp5519378 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content59% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003513925 
Protein GI291302647 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.223967 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGAAT ACGCACCAGA GGCCCTCAAG TGGCTCGCCA GAGAGATCAT CAAGGCGATT 
CCGTCCGCTG AGTTGTCCGG AATTGTGGGG GATCCCGCCC ACACTTACGG GTACCACCGG
TGTCGTAACA AGCTCCCATC CAGCGACTAC AGTGTCCAGA CGAAGCCCGA CCGGGAAGGG
GACGGCGACG CCGCTTCCGC CCTCGACATG AAGTTCAACG CCGAGTGGAT GAAGAAGATC
ACCCGGCGCC TACTCGACTC CGCCAAGGAT CAGAACGACC CACGGCTGAA CTACATGCGC
GAGTTCTTTG GCACTTTGGA CGGTAAGAAG GTCACCGGGT GGGATACCTA TTACGGTAAA
CCGGTAACCA GCGACGACTC TCACTTGTGG CATATTCATA TGTCCATATT GCGCAAGTAC
TGTACGTCCA AAGACAAAAT GGCGAACATT CTTTCCGTCA TTAAAGGAGA AGACGACATG
GATCTTGGAG ATCGGGTAAA GGTCGCCGAC TGGATCAACG ACAGGTGGGA CGATGTCGGC
GATTCCATTT CCGTCCGCAC CGCTCTGGGC TCCAGCTACG GCCACGCCCG CAGCGCCAAG
GACGGCATCT ACGACAAGGT CATCCCGATG CTGGAGAAGC TGACCGCGGC GCGGGAAGGC
GGCGCGGCGG CACTCAGCAA CGAGGACCTG AAGCAGAAGC TCACCGAGTC CCTCACCGAC
TCCCTGGGTG ACAAGTTCGA GGACCTCGAC GGCGACGACC TCGCCGAAGC CGTCGAGAAG
GCCGTCGACA AGGCGCTGGA CTCGCTCAAC AGCTGA
 
Protein sequence
MAEYAPEALK WLAREIIKAI PSAELSGIVG DPAHTYGYHR CRNKLPSSDY SVQTKPDREG 
DGDAASALDM KFNAEWMKKI TRRLLDSAKD QNDPRLNYMR EFFGTLDGKK VTGWDTYYGK
PVTSDDSHLW HIHMSILRKY CTSKDKMANI LSVIKGEDDM DLGDRVKVAD WINDRWDDVG
DSISVRTALG SSYGHARSAK DGIYDKVIPM LEKLTAAREG GAAALSNEDL KQKLTESLTD
SLGDKFEDLD GDDLAEAVEK AVDKALDSLN S