Gene Snas_5193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5193 
Symbol 
ID8886401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5515117 
End bp5516136 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content72% 
IMG OID 
Productribosome small subunit-dependent GTPase A 
Protein accessionYP_003513921 
Protein GI291302643 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.186042 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACCGAG CTGGTGGGGG CCCGGCCCTG ACCCGGCGGC GGCAGTACGA CGAGGACGAC 
GTCCGGGTTC GCCCCGGGCG TGGCTCCCGA CCCCGTACCC GCACCCGCCC CAAGCACGCC
GACGCCGTCG ACGGCTTCGT CACCACCGTC GACAGAGGAC GGTACACCTG CCGGGTCGGC
GACACCGACG TGACCGCCAT GCGCGCCCGC GAACTGGGTC GCAAGGGCGT CGTGGTCGGC
GACCGGGTCT CCCTCGTGGG CGACACCTCC GGACGCGACG GCACCCTGGC GCGCATCGTC
CGCATCGGCG AACGGCACGG CGAACTGCGC CGCACCGCCG ACGACGACGA GGCGCTCATC
GAACGCATCA TCGTGGCCAA TGTGGACCAG CTCGTGGTGG TGGCCTCGCT GGCCGATCCG
CCGCCGCGCA CCGGCTTCAT CGACCGGTGT CTGGTGGCCG CCTTCGACGC CGACATCGCG
CCACTGCTGT GCCTGACCAA GGCCGACATC GACACCGAGG ACGCCGCGCT GGCCGAGGTG
CTGTCCTACT ACGCCGACCT CGAGTTCGAC CACATCACCT GCCACCCCGA CGAACCGCTG
GACGAGCTGC TGGCGAAGCT GCACGGCAAA CTGTCCGTCC TCATCGGCCA CTCGGGCGTC
GGAAAGTCCA CTCTGGTCAA CCGCCTGGTG CCCGACGCCG ACCGCTCCGT CGGCGTCGTC
AGCGCCATCG GCAAGGGCCG CCACACCTCG ACCAACGCCG TGGCCCTGGA GCTGCCCGAC
AGCGGCTGGA TCGTCGACAC CCCGGGCGTG CGCTCCTTCG GGCTGGCCCA CGTGTCCGCC
GACTCGCTGC TGCTCGCCTT CGGCGACCTG GCCGAGGTCG CCACCGGCTG CCCGCGCGGC
TGCGACCACA CCGGCAACTC CGGCGACTGC GCCCTGGACA GCCTGCGCGC CGCCGACGGT
ACCGCGCCAC AACGGCTGCT GTCCTACCGG CGGCTCCTGG AAACCTCGTC GAGTCAATAG
 
Protein sequence
MDRAGGGPAL TRRRQYDEDD VRVRPGRGSR PRTRTRPKHA DAVDGFVTTV DRGRYTCRVG 
DTDVTAMRAR ELGRKGVVVG DRVSLVGDTS GRDGTLARIV RIGERHGELR RTADDDEALI
ERIIVANVDQ LVVVASLADP PPRTGFIDRC LVAAFDADIA PLLCLTKADI DTEDAALAEV
LSYYADLEFD HITCHPDEPL DELLAKLHGK LSVLIGHSGV GKSTLVNRLV PDADRSVGVV
SAIGKGRHTS TNAVALELPD SGWIVDTPGV RSFGLAHVSA DSLLLAFGDL AEVATGCPRG
CDHTGNSGDC ALDSLRAADG TAPQRLLSYR RLLETSSSQ